Construct: ORF TRCN0000479195

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016144.1_s317c1
Derived from:
ccsbBroadEn_11191
DNA Barcode:
CTTACGAATAACTTTCACCGCCGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TLE3 (7090)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479195
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7090 TLE3 TLE family member 3, transc... NM_001282980.2 98.2% 98.1% (many diffs)
2 human 7090 TLE3 TLE family member 3, transc... XM_006720665.4 97.9% 97.9% (many diffs)
3 human 7090 TLE3 TLE family member 3, transc... NM_001282979.2 97.8% 97.8% (many diffs)
4 human 7090 TLE3 TLE family member 3, transc... XM_011521980.3 97.7% 97.6% (many diffs)
5 human 7090 TLE3 TLE family member 3, transc... NM_005078.4 97.6% 97.5% (many diffs)
6 human 7090 TLE3 TLE family member 3, transc... NM_001105192.3 97.2% 97.1% (many diffs)
7 human 7090 TLE3 TLE family member 3, transc... XM_011521978.3 96.9% 96.9% (many diffs)
8 human 7090 TLE3 TLE family member 3, transc... NM_001282981.1 96.8% 96.9% (many diffs)
9 human 7090 TLE3 TLE family member 3, transc... XM_005254633.3 96.6% 96.6% (many diffs)
10 human 7090 TLE3 TLE family member 3, transc... XM_005254623.4 96.6% 96.5% (many diffs)
11 human 7090 TLE3 TLE family member 3, transc... XM_011521977.3 96.4% 96.4% (many diffs)
12 human 7090 TLE3 TLE family member 3, transc... XM_011521976.3 96.3% 96.3% (many diffs)
13 human 7090 TLE3 TLE family member 3, transc... NM_020908.3 96% 96% (many diffs)
14 human 7090 TLE3 TLE family member 3, transc... XM_005254622.5 95.9% 95.9% (many diffs)
15 human 7090 TLE3 TLE family member 3, transc... XM_005254628.4 95.4% 95.4% (many diffs)
16 human 7090 TLE3 TLE family member 3, transc... XM_005254625.4 94.8% 94.8% (many diffs)
17 human 7090 TLE3 TLE family member 3, transc... XM_011521981.2 92.9% 91.1% (many diffs)
18 human 7090 TLE3 TLE family member 3, transc... XM_011521979.3 91.7% 91.8% (many diffs)
19 human 7090 TLE3 TLE family member 3, transc... XM_011521983.3 88.9% 88.8% (many diffs)
20 human 7090 TLE3 TLE family member 3, transc... XM_011521982.3 88.3% 88.3% (many diffs)
21 human 7090 TLE3 TLE family member 3, transc... NM_001282982.2 87.6% 87.7% (many diffs)
22 human 7090 TLE3 TLE family member 3, transc... XM_017022532.2 67.7% 65.7% (many diffs)
23 mouse 21887 Tle3 transducin-like enhancer of... XM_006511030.3 90% 97.2% (many diffs)
24 mouse 21887 Tle3 transducin-like enhancer of... XM_006511029.3 89.9% 97.1% (many diffs)
25 mouse 21887 Tle3 transducin-like enhancer of... XM_006511031.3 89.6% 96.8% (many diffs)
26 mouse 21887 Tle3 transducin-like enhancer of... NM_001083928.1 89.5% 96.7% (many diffs)
27 mouse 21887 Tle3 transducin-like enhancer of... XM_017313278.1 89.4% 96.6% (many diffs)
28 mouse 21887 Tle3 transducin-like enhancer of... NM_009389.2 89.4% 96.5% (many diffs)
29 mouse 21887 Tle3 transducin-like enhancer of... XM_017313279.1 89% 96.2% (many diffs)
30 mouse 21887 Tle3 transducin-like enhancer of... XM_006511028.3 89% 96.1% (many diffs)
31 mouse 21887 Tle3 transducin-like enhancer of... XM_006511026.3 88.7% 95.9% (many diffs)
32 mouse 21887 Tle3 transducin-like enhancer of... XM_006511027.3 88.4% 95.5% (many diffs)
33 mouse 21887 Tle3 transducin-like enhancer of... XM_017313277.1 88.3% 95.4% (many diffs)
34 mouse 21887 Tle3 transducin-like enhancer of... NM_001083927.1 88.2% 95.3% (many diffs)
35 mouse 21887 Tle3 transducin-like enhancer of... XM_006511025.3 87.8% 94.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2382
ORF length:
2316
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcc cccgccccct cccctgtctt gtcttcgcgg gctccaggct ccccatcaac
121ccgggcagcc gggatttaaa ttcacggtgg ctgagtcttg tgacaggatc aaagacgaat
181tccagttcct gcaagctcag tatcacagcc tcaaagtgga gtacgacaag ctggcaaacg
241agaagacgga gatgcagcgc cattatgtga tgtactatga gatgtcctat ggcttgaaca
301ttgaaatgca caagcagaca gagattgcga agagactgaa cacaatttta gcacagatca
361tgcctttcct gtcacaagag caccagcagc aggtggcgca ggcagtggag cgcgccaagc
421aggtcaccat gacggagctg aacgccatca tcgggcagca gctccaggcg cagcacctct
481cccatgccac acacggcccc ccggtccagt tgccacccca cccgtcaggt ctccagcctc
541caggaatccc cccagtgaca gggagcagct ccgggctgct ggcactgggc gccctgggca
601gccaggccca tctgacggtg aaggatgaga agaaccacca tgaactcgat cacagagaga
661gagaatccag tgcgaataac tctgtgtcac cctcggaaag cctccgggcc agtgagaagc
721accggggctc tgcggactac agcatggaag ccaagaagcg gaaggcggaa gagaaggaca
781gcttgagccg atacgacagt gatggggaca agagtgatga tctggtggtg gatgtttcca
841atgaggaccc cgcaacgccc cgggtcagcc cggcacactc ccctcctgaa aatgggctgg
901acaaggcccg tagcctgaaa aaagatgccc ccaccagccc tgcctcggtg gcctcttcca
961gtagcacacc ttcctccaag accaaagacc ttggtcataa cgacaaatcc tccacccctg
1021ggctcaagtc caacacacca accccaagga acgacgcccc aactccaggc accagcacga
1081ccccagggct caggtcgatg ccgggtaaac ctccgggcat ggacccgata ggtataatgg
1141cctcggctct gcgcacgccc atctccatca ccagctccta tgcggcgccc ttcgccatga
1201tgagccacca tgagatgaac ggctccctca ccagtcctgg cgcctacgcc ggcctccaca
1261acatcccacc ccagatgagc gccgccgccg ctgctgcagc cgctacctat ggccgatcgc
1321caatggttgg ttttgaccct caccccccga tgcgggccac aggcctcccc tcaagcctgg
1381cctccattcc tggaggaaaa ccagcgtact cattccatgt gagtgctgat gggcagatgc
1441agcccgtgcc cttcccccac gacgccctgg caggccccgg catcccgagg cacgcccggc
1501agatcaacac actcagccac ggggaggtgg tgtgtgccgt gaccatcagc aaccccacga
1561ggcacgtcta cacaggtggc aagggctgcg tgaagatctg ggacatcagc cagccaggca
1621gcaagagccc catctcccag ctggactgcc tgaacaggga caattacatc cgctcctgca
1681agctgctccc tgatgggcgc acgctcatcg tgggcggcga ggccagcacg ctcaccatct
1741gggacctggc ctcacccacg ccccgcatca aggccgagct gacgtcctcg gctcccgcct
1801gttatgccct ggccattagc cctgacgcca aagtctgctt ctcctgctgc agcgatggga
1861acattgctgt ctgggacctg cacaaccaga ccctggtcag gcagttccag ggccacacag
1921atggggccag ctgcatagac atctcccatg atggcaccaa actgtggaca gggggcctgg
1981acaacacagt gcgctcctgg gacctgcggg agggccgaca gctacagcag catgacttca
2041cttcccagat cTTCTCGCTG GGCTACTGCC CCACTGGGGA GTGGCTGGCT GTGGGCATGG
2101AGAGCAGCAA CGTGGAGGTG CTGCACCACA CCAAGCCTGA CAAGTACCAG CTGCACCTGC
2161ACGAGAGCTG CGTGCTCTCC CTCAAGTTCG CCTACTGCGG CAAGTGGTTC GTGAGCACTG
2221GGAAAGATAA CCTTCTCAAC GCCTGGAGGA CGCCTTATGG AGCCAGCATA TTCCAGTCTA
2281AAGAATCCTC GTCTGTCTTG AGTTGTGACA TTTCAGCGGA TGACAAATAC ATTGTAACAG
2341GCTCTGGTGA CAAGAAGGCC ACAGTTTATG AGGTCATCTA CTACCCAACT TTCTTGTACA
2401AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
2461AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
2521AGGACGACTT ACGAATAACT TTCACCGCCG GACGCGTTAA GTCgacaatc aacctctgga
2581ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)