Construct: ORF TRCN0000479338

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001723.1_s317c1
Derived from:
ccsbBroadEn_04693
DNA Barcode:
CTGAATCAAGCTCCCACCTTGACC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF526 (116115)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479338
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 116115 ZNF526 zinc finger protein 526 NM_001314033.3 100% 100%
2 human 116115 ZNF526 zinc finger protein 526 NM_133444.3 100% 100%
3 mouse 210172 Zfp526 zinc finger protein 526 NM_175436.5 82.7% 86.5% (many diffs)
4 mouse 210172 Zfp526 zinc finger protein 526 XM_006539715.3 82.7% 86.5% (many diffs)
5 mouse 210172 Zfp526 zinc finger protein 526 XM_006539716.2 82.7% 86.5% (many diffs)
6 mouse 210172 Zfp526 zinc finger protein 526 XM_006539713.3 79% 82.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2076
ORF length:
2010
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggc agaggtggtg gctgaggtgg ccgagatgcc aacacagatg tcaccagggg
121cagtggagat gtcaacacct atgtcggcag agatgatgga gatgtcaaca gaagtgactg
181agatgacacc tggggaggcc cttgcctcat ccctcttctt ccagcatcac cagttcatgt
241gctctgagtg tggcagcctc tataacacac tggaggaagt cctctcacac caggagcagc
301acatgcttgc tgtctcagag gaggaggcac tgaccacaca gaatgttggc ctggagccgg
361agctggtgcc gggtgctgag gggcccttcc agtgtggtga atgcagccag ctcatcctct
421cccctgggga gctcctggcc caccaggatg cccacctccg agagtctgca aaccagatcc
481aataccagtg ctgggactgc caggagctgt tcccctcgcc cgagctgtgg gtggctcatc
541gaaaggccca gcacctttct gctacggtag ctgagccacc agtgccacct cctttgcctc
601ccccaacacc actgcctcca ccttctcccc catccgaagt caagatggag ccctatgagt
661gtcctgagtg ctctaccctc tgcgccaccc ctgaggagtt cttggagcat cagggcaccc
721actttgactc cctagagaaa gaggagcgca atgggttgga ggaggaggaa gaggacgatg
781aggaggatga agaagatgat gaagagatgg aggatgagga ggccatggca gaggtcggtg
841atgatgctgt gggaggtgac gagtccacag ctggctgggc tcagggctgc ggggactgtc
901cccagcacca gccctcagca ggggctcgcc ggcaacaccg gcggacggct cacagcccgg
961catctgccac ccaccccttc cactgcagcc agtgtcagcg cagtttcagc tccgccaacc
1021ggctgcaggc tcatgggcgg gcccatgttg gtggcacaca tgagtgtaca acctgctcca
1081aggtcttcaa gaaagcagca tcgcttgagc agcacttgcg gctgcatcgc ggggaagccc
1141gctacctctg tgtagactgt ggccgcggct ttggcacaga actcacgttg gtggctcacc
1201ggcgggccca cactgccaac ccattgcatc gctgtcgttg cggcaagacg ttcagcaaca
1261tgaccaagtt cctctaccac cggcgcactc acgccggcaa aagcggggca cctcccacag
1321gagcaacagc tcccccagct ccagcggagc ccacccctcc accaccaccc cctgccccac
1381ctgcccagct gccctgccca cagtgctcca agtcctttgc ctcagcttcc cggctgtccc
1441ggcaccggcg tgcagtacac gggccccctg aacggcgtca ccgctgtggg gtttgtggca
1501agggcttcaa gaagctgatc cacgtgcgca accacctgcg gacacacacg ggtgagaggc
1561ccttccagtg ccactcatgt ggcaagacct ttgcttcttt ggccaaccTC AGCCGCCACC
1621AGCTGACCCA TACGGGTGCA CGTCCCTACC AATGCCTGGA CTGTGGCAAG CGCTTCACAC
1681AGAGCTCCAA CCTGCAGCAG CACCGGCGGT TGCACTTGCG GCCAGTCGCC TTTGCCCGCG
1741CCCCCCGCCT CCCCATCACT GGTCTCTACA ACAAGAGTCC CTACTACTGC GGGACTTGTG
1801GCCGCTGGTT CCGCGCCATG GCGGGCTTGC GACTGCATCA GCGGGTCCAT GCCCGAGCTC
1861GGACTTTGAC GCTACAGCCT CCCAGATCAC CATCTCCTGC CCCACCCCCA CCTCCAGAGC
1921CTCAACAGAC TATCATGTGC ACAGAGCTGG GGGAGACCAT CGCCATCATT GAGACATCCC
1981AGCCACTGGC GCTTGAGGAC ACCCTGCAGC TGTGCCAGGC TGCACTGGGG GCCAGTGAAG
2041CAGGCGGGCT CTTGCAGTTG GACACGGCCT TCGTGTGCCC AACTTTCTTG TACAAAGTGG
2101TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
2161CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
2221ACTGAATCAA GCTCCCACCT TGACCACGCG TTAAGTCgac aatcaacctc tggattacaa
2281aatttgtgaa agatt

Download FASTA (ORF) (Full)