Construct: ORF TRCN0000479563

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001242.1_s317c1
Derived from:
ccsbBroadEn_00332
DNA Barcode:
CGAGCGACGGGGTCGCACTCCCCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CCR3 (1232)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479563
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1232 CCR3 C-C motif chemokine receptor 3 NM_001837.4 100% 100%
2 human 1232 CCR3 C-C motif chemokine receptor 3 NM_178329.3 100% 100%
3 human 1232 CCR3 C-C motif chemokine receptor 3 XM_006712960.3 100% 100%
4 human 1232 CCR3 C-C motif chemokine receptor 3 XM_011533335.2 100% 100%
5 human 1232 CCR3 C-C motif chemokine receptor 3 NM_001164680.2 95.1% 95.1% 1_54del
6 human 1232 CCR3 C-C motif chemokine receptor 3 NM_178328.1 94.4% 94.4% 1_63del
7 human 1232 CCR3 C-C motif chemokine receptor 3 XM_017005685.1 86.5% 86.5% 1_165del
8 human 1232 CCR3 C-C motif chemokine receptor 3 XM_017005686.1 86.5% 86.5% 1_165del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1131
ORF length:
1065
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgac aacctcacta gatacagttg agacctttgg taccacatcc tactatgatg
121acgtgggcct gctctgtgaa aaagctgata ccagagcact gatggcccag tttgtgcccc
181cgctgtactc cctggtgttc actgtgggcc tcttgggcaa tgtggtggtg gtgatgatcc
241tcataaaata caggaggctc cgaattatga ccaacatcta cctgctcaac ctggccattt
301cggacctgct cttcctcgtc acccttccat tctggatcca ctatgtcagg gggcataact
361gggtttttgg ccatggcatg tgtaagctcc tctcagggtt ttatcacaca ggcttgtaca
421gcgagatctt tttcataatc ctgctgacaa tcgacaggta cctggccatt gtccatgctg
481tgtttgccct tcgagcccgg actgtcactt ttggtgtcat caccagcatc gtcacctggg
541gcctggcagt gctagcagct cttcctgaat ttatcttcta tgagactgaa gagttgtttg
601aagagactct ttgcagtgct ctttacccag aggatacagt atatagctgg aggcatttcc
661acactctgag aatgaccatc ttctgtctcg ttctccctct gctcgttatg gccatctgct
721acacaggaat catcaaaacg ctgctgaggt gccccagtaa aaaaaagtac aaggccatcc
781ggctcatttt tgtcatcatG GCGGTGTTTT TCATTTTCTG GACACCCTAC AATGTGGCTA
841TCCTTCTCTC TTCCTATCAA TCCATCTTAT TTGGAAATGA CTGTGAGCGG AGCAAGCATC
901TGGACCTGGT CATGCTGGTG ACAGAGGTGA TCGCCTACTC CCACTGCTGC ATGAACCCGG
961TGATCTACGC CTTTGTTGGA GAGAGGTTCC GGAAGTACCT GCGCCACTTC TTCCACAGGC
1021ACTTGCTCAT GCACCTGGGC AGATACATCC CATTCCTTCC TAGTGAGAAG CTGGAAAGAA
1081CCAGCTCTGT CTCTCCATCC ACAGCAGAGC CGGAACTCTC TATTGTGTTT TACCCAACTT
1141TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1201CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1261CTTGTGGAAA GGACGACGAG CGACGGGGTC GCACTCCCCT ACGCGTTAAG TCgacaatca
1321acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)