Construct: ORF TRCN0000479689

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011631.1_s317c1
Derived from:
ccsbBroadEn_13634
DNA Barcode:
CACCCTTTACACGGATAGCGCCAG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD36 (375248)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479689
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 375248 ANKRD36 ankyrin repeat domain 36 NM_198555.4 100% 100%
2 human 57730 ANKRD36B ankyrin repeat domain 36B NM_001353337.2 91% 89.5% (many diffs)
3 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511557.3 18.1% 17.7% (many diffs)
4 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511558.2 18.1% 17.7% (many diffs)
5 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511555.2 17.8% 17.5% (many diffs)
6 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511556.2 17.8% 17.5% (many diffs)
7 human 57730 ANKRD36B ankyrin repeat domain 36B XR_002959321.1 12.6% (many diffs)
8 human 57730 ANKRD36B ankyrin repeat domain 36B XR_001738869.2 11.8% (many diffs)
9 human 375248 ANKRD36 ankyrin repeat domain 36 XM_011511131.1 11.8% 11.7% 487delT;490_4131delinsA
10 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004584.2 11.7% 11.4% (many diffs)
11 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004583.2 11.2% 10.9% (many diffs)
12 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004579.2 11.1% 10.8% (many diffs)
13 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004580.2 11.1% 10.8% (many diffs)
14 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004581.2 11.1% 10.8% (many diffs)
15 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004582.2 11.1% 10.8% (many diffs)
16 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004578.2 10.8% 10.6% (many diffs)
17 human 57730 ANKRD36B ankyrin repeat domain 36B NM_025190.3 10.8% 10.6% (many diffs)
18 human 57730 ANKRD36B ankyrin repeat domain 36B XM_005263995.5 10.8% 10.6% (many diffs)
19 human 57730 ANKRD36B ankyrin repeat domain 36B XM_006712661.2 10.8% 10.6% (many diffs)
20 human 375248 ANKRD36 ankyrin repeat domain 36 XR_001738741.1 10.4% 1_554del;1041delT;1044_4670delinsA
21 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004044.1 9.1% 9.1% 487delT;490_5337delinsA
22 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004045.1 9.1% 9.1% 487delT;490_5337delinsA
23 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004039.1 8.9% 8.9% 487delT;490_5439delinsA
24 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004040.1 8.9% 8.9% 487delT;490_5439delinsA
25 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004041.1 8.9% 8.9% 487delT;490_5439delinsA
26 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004043.1 8.9% 8.9% 487delT;490_5439delinsA
27 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004025.1 8.8% 8.7% 487delT;490_5541delinsA
28 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004026.1 8.8% 8.7% 487delT;490_5541delinsA
29 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004027.1 8.8% 8.7% 487delT;490_5541delinsA
30 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004028.1 8.8% 8.7% 487delT;490_5541delinsA
31 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004030.1 8.8% 8.7% 487delT;490_5541delinsA
32 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004031.1 8.8% 8.7% 487delT;490_5541delinsA
33 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004032.1 8.8% 8.7% 487delT;490_5541delinsA
34 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004033.1 8.8% 8.7% 487delT;490_5541delinsA
35 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004034.1 8.8% 8.7% 487delT;490_5541delinsA
36 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004035.1 8.8% 8.7% 487delT;490_5541delinsA
37 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004036.1 8.8% 8.7% 487delT;490_5541delinsA
38 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004037.1 8.8% 8.7% 487delT;490_5541delinsA
39 human 375248 ANKRD36 ankyrin repeat domain 36 XM_024452877.1 8.8% 8.7% 487delT;490_5541delinsA
40 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004024.1 8.7% 8.6% 487delT;490_5607delinsA
41 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004011.1 8.6% 8.6% 487delT;490_5643delinsA
42 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004012.1 8.6% 8.6% 487delT;490_5643delinsA
43 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004013.1 8.6% 8.6% 487delT;490_5643delinsA
44 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004014.1 8.6% 8.6% 487delT;490_5643delinsA
45 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004015.1 8.6% 8.6% 487delT;490_5643delinsA
46 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004016.1 8.6% 8.6% 487delT;490_5643delinsA
47 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004017.1 8.6% 8.6% 487delT;490_5643delinsA
48 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004018.1 8.6% 8.6% 487delT;490_5643delinsA
49 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004019.1 8.6% 8.6% 487delT;490_5643delinsA
50 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004020.1 8.6% 8.6% 487delT;490_5643delinsA
51 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004021.1 8.6% 8.6% 487delT;490_5643delinsA
52 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004022.1 8.6% 8.6% 487delT;490_5643delinsA
53 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004023.1 8.6% 8.6% 487delT;490_5643delinsA
54 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004010.1 8.4% 8.4% 487delT;490_5742delinsA
55 human 375248 ANKRD36 ankyrin repeat domain 36 NM_001354587.1 8.4% 8.4% 487delT;490_5745delinsA
56 human 375248 ANKRD36 ankyrin repeat domain 36 XM_006712514.3 8.4% 8.4% 487delT;490_5745delinsA
57 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004009.1 8.4% 8.4% 487delT;490_5745delinsA
58 human 57730 ANKRD36B ankyrin repeat domain 36B XR_922976.2 8.2% (many diffs)
59 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959292.1 7.9% 1_554del;1041delT;1044_6164delinsA
60 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959293.1 7.5% 1_554del;1041delT;1044_6501delinsA
61 human 400986 ANKRD36C ankyrin repeat domain 36C NM_001310154.3 7.1% 6.4% (many diffs)
62 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959294.1 5.4% 1_554del;1041delT;1044_9034delinsA
63 human 375248 ANKRD36 ankyrin repeat domain 36 XR_922917.2 4.7% 1_554del;1041delT;1044_10338delinsA
64 human 375248 ANKRD36 ankyrin repeat domain 36 XR_001738739.2 4.4% 1_554del;1041delT;1044_10935delinsA
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
555
ORF length:
489
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga agacggcaag cgggagaggt ggcccaccct catggagcgc ttgtgctcgg
121atggcttcgc atttccccaa taccccatta aaccgtatca tctgaagagg atccacagag
181ctgtcttaca tggTAATCTA GAGAAACTGA AGTACCTTCT GCTCACGTAT TATGACGCCA
241ATAAGAGAGA CAGGAAGGAA AGGACCGCCC TACATTTGGC CTGTGCCACT GGCCAACCGG
301AAATGGTACA TCTCCTGGTG TCCAGAAGAT GTGAGCTTAA CCTCTGCGAC CGTGAAGACA
361GGACACCTCT GATCAAGGCT GTACAACTGA GGCAGGAGGC TTGTGCAACT CTTCTGCTGC
421AAAATGGCGC CAATCCAAAT ATTACGGATT TCTTTGGAAG GACTGCTCTG CACTACGCTG
481TGTATAATGA AGATACATCC ATGATAGAAA AACTTCTTTC ACATGGTACA AATATTGAAG
541AATGCAGCAA GGTATACCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
601CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
661TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA CACCCTTTAC ACGGATAGCG
721CCAGACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)