Construct: ORF TRCN0000480051

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002283.1_s317c1
Derived from:
ccsbBroadEn_02568
DNA Barcode:
GCCTTTAATCGGCGTATCCCCGCA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KDELR1 (10945)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480051
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10945 KDELR1 KDEL endoplasmic reticulum ... NM_006801.3 100% 100%
2 mouse 68137 Kdelr1 KDEL (Lys-Asp-Glu-Leu) endo... NM_133950.2 91.1% 99.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
702
ORF length:
636
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa tctcttccga ttcctgggag acctctccca cctcctcgcc atcatcttgc
121tactgctcaa aatctggaag tcccgctcgt gcgccggaat ttcagggaag agccaggtcc
181tgtttgctgt ggtgttcact gcccgatatc tggacctctt caccaactac atctcactct
241acaacacgtg tatgaaggtg gtctacatag cctgctcctt caccacggtc tggttgattt
301atagcaagtt caaagctact tacgatggga accatgacac gttcagagtg gagttcctgg
361tcgttcccac agccattctg gcgttcctgg tcaatcatga cttcacccct ctggagatcc
421tctggaCCTT CTCCATCTAC CTGGAGTCAG TGGCCATCTT GCCGCAGCTG TTCATGGTGA
481GCAAGACCGG CGAGGCGGAG ACCATCACCA GCCACTACTT GTTTGCGCTA GGCGTTTACC
541GCACGCTCTA TCTCTTCAAC TGGATCTGGC GCTACCATTT CGAGGGCTTC TTCGACCTCA
601TCGCCATTGT GGCAGGCCTG GTCCAGACAG TCCTCTACTG CGATTTCTTC TACCTCTATA
661TCACCAAAGT CCTAAAGGGG AAGAAGTTGA GTTTGCCGGC ATACCCAACT TTCTTGTACA
721AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
781AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
841AGGACGAGCC TTTAATCGGC GTATCCCCGC AACGCGTTAA GTCgacaatc aacctctgga
901ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)