Construct: ORF TRCN0000480238

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013981.3_s317c1
Derived from:
ccsbBroadEn_04606
DNA Barcode:
GGGTTTGGCTTAGTACCATGTGCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TBCK (93627)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480238
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93627 TBCK TBC1 domain containing kinase NM_033115.5 99.9% 99.8% 607C>G
2 human 93627 TBCK TBC1 domain containing kinase NM_001163437.3 94.6% 88.3% (many diffs)
3 human 93627 TBCK TBC1 domain containing kinase NM_001163435.3 92.9% 92.7% 266_454del;796C>G
4 human 93627 TBCK TBC1 domain containing kinase NM_001163436.4 92.9% 92.7% 266_454del;796C>G
5 human 93627 TBCK TBC1 domain containing kinase XM_011532417.2 92.9% 92.7% 266_454del;796C>G
6 human 93627 TBCK TBC1 domain containing kinase XM_017008846.1 92.9% 92.7% 266_454del;796C>G
7 human 93627 TBCK TBC1 domain containing kinase XM_024454281.1 92.9% 92.7% 266_454del;796C>G
8 human 93627 TBCK TBC1 domain containing kinase XM_024454282.1 92.9% 92.7% 266_454del;796C>G
9 human 93627 TBCK TBC1 domain containing kinase XM_017008848.1 92.2% 87.7% (many diffs)
10 human 93627 TBCK TBC1 domain containing kinase XM_017008847.2 88.8% 88.6% 266_454del;796C>G;2571_2572ins108
11 human 93627 TBCK TBC1 domain containing kinase NM_001290768.2 86.8% 86.7% 0_1ins327;280C>G
12 human 93627 TBCK TBC1 domain containing kinase XM_017008849.1 86.8% 86.7% 0_1ins327;280C>G
13 human 93627 TBCK TBC1 domain containing kinase XR_001741354.2 72.6% (many diffs)
14 human 93627 TBCK TBC1 domain containing kinase XR_938800.3 71.3% (many diffs)
15 human 93627 TBCK TBC1 domain containing kinase XR_001741353.2 70% (many diffs)
16 human 93627 TBCK TBC1 domain containing kinase XR_002959772.1 28.6% (many diffs)
17 mouse 271981 Tbck TBC1 domain containing kinase NM_001163455.2 82.9% 88.8% (many diffs)
18 mouse 271981 Tbck TBC1 domain containing kinase XM_030252639.1 80.5% 85.3% (many diffs)
19 mouse 271981 Tbck TBC1 domain containing kinase XM_006501553.4 66.1% 67.4% (many diffs)
20 mouse 271981 Tbck TBC1 domain containing kinase XR_001783696.2 33.3% (many diffs)
21 mouse 271981 Tbck TBC1 domain containing kinase XR_003954329.1 31.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2556
ORF length:
2490
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt tcccctgaag gacgctgaaa tgggagcctt taccttcttt gcctcggctc
121tgccacatga tgtttgtgga agcaatggac ttcctctcac accaaattcc atcaaaattt
181tagggcgctt tcaaatcctt aaaaccatca cccatcccag actctgccag tatgtggata
241tttctagggg aaagcatgaa cgactagtgg tcgtggctga acattgtgaa cgtagtctgg
301aagacttgct tcgagaaagg aaacctgtga ggtatccctc gtacttggcc cctgaggtaa
361ttgcacaggg aattttcaaa accactgatc acatgccaag taaaaaacca ttgccttctg
421gccccaaatc agatgtatgg tctcttggaa tcattttatt tgagctttgt gtgggaagaa
481aattatttca gagcttggat atttctgaaa gactaaaatt tttgcttact ttggattgtg
541tagatgacac tttaatagtt ctggctgaag agcatggttg tttggacatt ataaaggagc
601ttcctgaaac tgtgatagat cttttgaata agtgccttac cttccatcct tctaagaggc
661caaccccaga tgaattaatg aaggacaaag tattcagtga ggtatcacct ttatataccc
721cctttaccaa acctgccagt ctgttttcat cttctctgag atgtgctgat ttaactctgc
781ctgaggatat cagtcagttg tgtaaagata taaataatga ttacctggca gaaagatcta
841ttgaagaagt gtattacctt tggtgtttgg ctggaggtga cttggagaaa gagcttgtca
901acaaggaaat cattcgatcc aaaccaccta tctgcacact ccccaatttt ctctttgagg
961atggtgaaag ctttggacaa ggtcgagata gaagctcgct tttagatgat accactgtga
1021cattgtcgtt atgccagcta agaaatagat tgaaagatgt tggtggagaa gcattttacc
1081cattacttga agatgaccag tctaatttac ctcattcaaa cagcaataat gagttgtctg
1141cagctgccac gctcccttta atcatcagag agaaggatac agagtaccaa ctaaatagaa
1201ttattctctt cgacaggctg ctaaaggctt atccatataa aaaaaaccaa atctggaaag
1261aagcaagagt tgacattcct cctcttatga gaggtttaac ctgggctgct cttctgggag
1321ttgagggagc tattcatgcc aagtacgatg caattgataa agacactcca attcctacag
1381atagacaaat tgaagtggat attcctcgct gtcatcagta cgatgaactg ttatcatcac
1441cagaaggtca tgcaaaattt aggcgtgtat taaaagcctg ggtagtgtct catcctgatc
1501ttgtgtattg gcaaggtctt gactcacttt gtgctccatt cctatatcta aacttcaata
1561atgaagcctt ggcttatgca tgtatgtctg cttttattcc caaatacctg tataacttct
1621tcttaaaaga caactcacat gtaatacaag agtatctgac tgtcttctct cagatgattg
1681catttcatga tccagagctg agtaatcatc tcaatgagat tggtttcatt ccagatctct
1741atgccatccc ttggtttctt accatgttta ctcatgtatt tccactacac aaaattttcc
1801acctctggga taccttacta cttgggaatt cctctttccc attctgtatt ggagtagcaa
1861ttcttcagca gctgcgggac cggcttttgg ctaatggctt taatgagtgt attcttctct
1921tctccgattt accagaaatt gacattgaac gctgtgtgag agaatctatc aacctgtttt
1981gttggactcc taaaagtgct acttacagac agcatgctca acctccaaag ccatcttctg
2041acagcagtgg aggcagaagt tcggcacctt atttctctgc tgagtgtcca gatcctccaa
2101agacagatct gtcaagagaa TCCATCCCAT TAAATGACCT GAAGTCAGAA GTATCACCAC
2161GGATTTCAGC AGAGGACCTG ATTGACTTGT GTGAGCTCAC AGTGACAGGC CACTTCAAAA
2221CACCCAGCAA GAAAACAAAG TCCAGTAAAC CAAAGCTCCT GGTGGTTGAC ATCCGGAATA
2281GTGAAGACTT TATTCGTGGT CACATTTCAG GAAGCATCAA CATTCCATTC AGTGCTGCCT
2341TCACTGCAGA AGGGGAGCTT ACCCAGGGCC CTTACACTGC TATGCTCCAG AACTTCAAAG
2401GGAAGGTCAT TGTCATCGTG GGGCATGTGG CAAAACACAC AGCTGAGTTT GCAGCTCACC
2461TTGTGAAGAT GAAATATCCA AGAATCTGTA TTCTAGATGG TGGCATTAAT AAAATAAAGC
2521CAACAGGCCT CCTCACCATC CCATCTCCTC AAATATGCCC AACTTTCTTG TACAAAGTGG
2581TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
2641CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
2701AGGGTTTGGC TTAGTACCAT GTGCCACGCG TTAAGTCgac aatcaacctc tggattacaa
2761aatttgtgaa agatt

Download FASTA (ORF) (Full)