Construct: ORF TRCN0000480363

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003329.1_s317c1
Derived from:
ccsbBroadEn_11974
DNA Barcode:
TCCTATGTCTCACCCTGGACAAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WAC (51322)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480363
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51322 WAC WW domain containing adapto... NM_016628.5 99.4% 98.7% 1917_1918delAA;1941_1942insTGAAGATG
2 human 51322 WAC WW domain containing adapto... NM_100264.3 92.5% 91.8% 0_1ins135;1782_1783delAA;1806_1807insTGAAGATG
3 human 51322 WAC WW domain containing adapto... XM_024448036.1 92.5% 91.8% 0_1ins135;1782_1783delAA;1806_1807insTGAAGATG
4 human 51322 WAC WW domain containing adapto... XM_017016315.2 92.4% 91.6% (many diffs)
5 human 51322 WAC WW domain containing adapto... NM_100486.4 83.6% 82.7% 610_611ins309;1608_1609delAA;1632_1633insTGAAGATG
6 human 51322 WAC WW domain containing adapto... XM_017016317.2 76.7% 75.8% (many diffs)
7 human 51322 WAC WW domain containing adapto... XM_017016318.2 76.5% 75.6% (many diffs)
8 human 51322 WAC WW domain containing adapto... XR_001747110.1 53.3% (many diffs)
9 human 51322 WAC WW domain containing adapto... XR_930491.2 52.3% (many diffs)
10 mouse 225131 Wac WW domain containing adapto... NM_153085.4 92.2% 93.8% (many diffs)
11 mouse 225131 Wac WW domain containing adapto... XM_006525803.3 91.4% 92.9% (many diffs)
12 mouse 225131 Wac WW domain containing adapto... XM_006525804.3 90.9% 92.5% (many diffs)
13 mouse 225131 Wac WW domain containing adapto... NM_001282093.1 85.6% 87% (many diffs)
14 mouse 225131 Wac WW domain containing adapto... XM_006525805.2 85.6% 87% (many diffs)
15 mouse 225131 Wac WW domain containing adapto... XM_011246888.2 85.6% 87% (many diffs)
16 mouse 225131 Wac WW domain containing adapto... NM_001146298.2 76.8% 78.2% (many diffs)
17 mouse 225131 Wac WW domain containing adapto... XM_006525806.3 76.1% 77.5% (many diffs)
18 mouse 225131 Wac WW domain containing adapto... XM_006525807.3 75.6% 77% (many diffs)
19 mouse 225131 Wac WW domain containing adapto... XM_017317866.1 70.2% 71.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2013
ORF length:
1947
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggt aatgtatgcg aggaaacagc agagactcag tgatggctgt cacgaccgga
121ggggggactc gcagccttac caggcactta agtattcatc gaagagtcac cccagtagcg
181gtgatcacag acatgaaaag atgcgagacg ccggagatcc ttcaccacca aataaaatgt
241tgcggagatc tgatagtcct gaaaacaaat acagtgacag cacaggtcac agtaaggcca
301aaaatgtgca tactcacaga gttagagaga gggatggtgg gaccagttac tctccacaag
361aaaattcaca caaccacagt gctcttcata gttcaaattc acattcttct aatccaagca
421ataacccaag caaaacttca gatgcacctt atgattctgc agatgactgg tctgagcata
481ttagctcttc tgggaaaaag tactactaca attgtcgaac agaagtttca caatgggaaa
541aaccaaaaga gtggcttgaa agagaacaga gacaaaaaga agcaaacaag atggcagtca
601acagcttccc aaaagatagg gattacagaa gagaggtgat gcaagcaaca gccactagtg
661ggtttgccag tggaatggaa gacaagcatt ccagtgatgc cagtagtttg ctcccacaga
721atattttgtc tcaaacaagc agacacaatg acagagacta cagactgcca agagcagaga
781ctcacagtag ttctacgcca gtacagcacc ccatcaaacc agtggttcat ccaactgcta
841ccccaagcac tgttccttct agtccattta cgctacagtc tgatcaccag ccaaagaaat
901catttgatgc taatggagca tctactttat caaaactgcc tacacccaca tcttctgtcc
961ctgcacagaa aacagaaaga aaagaatcta catcaggaga caaacccgta tcacattctt
1021gcacaactcc ttccacgtct tctgcctctg gactgaaccc cacatctgca cctccaacat
1081ctgcttcagc ggtccctgtt tctcctgttc cacagtcgcc aatacctccc ttacttcagg
1141acccaaatct tcttagacaa ttgcttcctg ctttgcaagc cacgctgcag cttaataatt
1201ctaatgtgga catatctaaa ataaatgaag ttcttacagc agctgtgaca caagcctcac
1261tgcagtctat aattcataag tttcttactg ctggaccatc tgctttcaac ataacgtctc
1321tgatttctca agctgctcag ctctctacac aagcccagcc atctaatcag tctccgatgt
1381ctttaacatc tgatgcgtca tccccaagat catatgtttc tccaagaata agcacacctc
1441aaactaacac agtccctatc aaacctttga tcagtactcc tcctgtttca tcacagccaa
1501aggttagtac tccagtagtt aagcaaggac cagtgtcaca gtcagccaca cagcagcctG
1561TAACTGCTGA CAAGCAGCAA GGTCATGAAC CTGTCTCTCC TCGAAGTCTT CAGCGCTCAA
1621GTAGCCAGAG AAGTCCATCA CCTGGTCCCA ATCATACTTC TAATAGTAGT AATGCATCAA
1681ATGCAACAGT TGTACCACAG AATTCTTCTG CCCGATCCAC GTGTTCATTA ACGCCTGCAC
1741TAGCAGCACA CTTCAGTGAA AATCTCATAA AACACGTTCA AGGATGGCCT GCAGATCATG
1801CAGAGAAGCA GGCATCAAGA TTACGCGAAG AAGCGCATAA CATGGGAACT ATTCACATGT
1861CCGAAATTTG TACTGAATTA AAAAATTTAA GATCTTTAGT CCGAGTATGT GAAATTCAAG
1921CAACTTTGCG AGAGCAAAGG ATACTATTTT TGAGACAACA AATTAAGGAA CTTGAAAAGC
1981TAAAATCAGA ATTCCTTCAT GGTGTGAAGA TGTGCCCAAC TTTCTTGTAC AAAGTGGTTG
2041ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
2101GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGATC
2161CTATGTCTCA CCCTGGACAA ACACGCGTTA AGTCgacaat caacctctgg attacaaaat
2221ttgtgaaaga tt

Download FASTA (ORF) (Full)