Construct: ORF TRCN0000480946

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003882.1_s317c1
Derived from:
ccsbBroadEn_12340
DNA Barcode:
CGGGCTCAATCCGAGCGGCAACGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF286A (57335)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000480946
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57335 ZNF286A zinc finger protein 286A NM_001288644.2 100% 100%
2 human 57335 ZNF286A zinc finger protein 286A NM_001288645.2 100% 100%
3 human 57335 ZNF286A zinc finger protein 286A NM_001288646.2 100% 100%
4 human 57335 ZNF286A zinc finger protein 286A NM_001288647.2 100% 100%
5 human 57335 ZNF286A zinc finger protein 286A NM_001288648.2 100% 100%
6 human 57335 ZNF286A zinc finger protein 286A NM_001288649.2 100% 100%
7 human 57335 ZNF286A zinc finger protein 286A NM_001369436.1 100% 100%
8 human 57335 ZNF286A zinc finger protein 286A NM_001369437.1 100% 100%
9 human 57335 ZNF286A zinc finger protein 286A NM_001369438.1 100% 100%
10 human 57335 ZNF286A zinc finger protein 286A NM_001369440.1 87% 87% 1_183del
11 human 57335 ZNF286A zinc finger protein 286A NM_001288643.2 80% 80% 1_306del
12 human 57335 ZNF286A zinc finger protein 286A NM_001130842.2 78.5% 78.5% 1_336del
13 human 57335 ZNF286A zinc finger protein 286A NM_020652.3 78.5% 78.5% 1_336del
14 human 57335 ZNF286A zinc finger protein 286A NM_001288642.2 72.5% 72.5% 1_465del
15 human 729288 ZNF286B zinc finger protein 286B (p... NR_160540.1 23.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1296
ORF length:
1227
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggagactaga ccacagagca aggattcaac ttcagtgcaa gatttttcca
121aagcagaatc atgcaaagtt gcaataatag acagactgac acggaatagt gtctatgact
181ctaacttgga agcagccctt gaatgtgaaa attggttaga gaatcagcaa ggaaatcagg
241agagacattt gagagaaatg ttcactcaca tgaattcact ctctgaggaa acagaccata
301agcatgatgt atactggaaa agcttcaatc agaaatctgt ccttatcact gaagacagag
361ttcccaaagg atcttatgcc ttccatacac ttgaaaaaag cttgaaacaa aaatcaaact
421taatgaaaaa gcagagaact tataaagaga aaaaacctca taaatgtaat gattgtggtg
481aactcttcac ctaccattca gtgcttattc gacaccagag agtccatact ggagagaaac
541cctatacctg caatgaatgt gggaaatctt ttagccacag agctaattta actaaacacc
601agagaactca tactagaatt ctctttgaat gcagtgaatg caagaaaacc ttcacagaaa
661gctcatccct tgcaacacat cagagaattc acgttggaga gagaccttat gaatgcaatg
721aatgtgggaa aggttttaat cgaagtacac atcttgtgca gcatcagttg attcatactg
781gagtgaagcc ttatgaatgt aatgaatgtg ataaagcttt tattcattca tcagcactca
841ttaaacatca aagaactcat actggagaga aaccttataa atgtcaagaa tgtgggaaag
901cctttagcca ttgctcatcc ctaactaagc aTCAGAGAGT TCATACTGGA GAAAAGCCAT
961ATGAATGCAG TGAATGTGGA AAAACTTTTA GTCAGAGCAC ACATCTTGTT CAACATCAGA
1021GAATTCACAC TGGAGAGAAA CCCTATGAGT GTAATGAATG TGGGAAAACC TTCAGCCGGA
1081GCTCCAATTT TGCTAAACAT CAAAGAATTC ATATTGGAAA GAAACCGTAC AAATGTAGCG
1141AGTGTGGAAA AGCCTTCATT CATTCATCAG CTCTCATTCA ACATCAGAGA ACTCATACCG
1201GAGAGAAACC CTTTAGATGT AATGAGTGTG GGAAAAGCTT TAAGTGCAGT TCATCTCTCA
1261TCAGACATCA AAGAGTTCAC ACTGAAGAGC AACCCTTGCC AACTTTCTTG TACAAAGTGG
1321TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
1381CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
1441ACGGGCTCAA TCCGAGCGGC AACGAACGCG TTAAGTCgac aatcaacctc tggattacaa
1501aatttgtgaa agatt

Download FASTA (ORF) (Full)