Construct: ORF TRCN0000481255

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005471.2_s317c1
Derived from:
ccsbBroadEn_15052
DNA Barcode:
ACTCATTCTGAACGTGCAGCACGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NME7 (29922)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481255
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 29922 NME7 NME/NM23 family member 7 NM_013330.5 99.9% 100% 207T>C
2 human 29922 NME7 NME/NM23 family member 7 NM_197972.2 90.3% 90.4% 0_1ins108;99T>C
3 human 29922 NME7 NME/NM23 family member 7 NR_104229.1 65.5% (many diffs)
4 mouse 171567 Nme7 NME/NM23 family member 7 NM_001293313.1 81.1% 84% (many diffs)
5 mouse 171567 Nme7 NME/NM23 family member 7 NM_138314.4 81.1% 84% (many diffs)
6 mouse 171567 Nme7 NME/NM23 family member 7 XM_006496692.2 77.2% 79.7% (many diffs)
7 mouse 171567 Nme7 NME/NM23 family member 7 XM_006496693.3 77.2% 79.7% (many diffs)
8 mouse 171567 Nme7 NME/NM23 family member 7 NM_178071.6 55.9% 56.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1194
ORF length:
1128
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa tcatagtgaa agattcgttt tcattgcaga gtggtatgat ccaaatgctt
121cacttcttcg acgttatgag cttttatttt acccagggga tggatctgtt gaaatgcatg
181atgtaaagaa tcatcgcacc tttttaaagc ggaccaaata tgataacctg cacttggaag
241atttatttat aggcaacaaa gtgaatgtct tctctcgaca actggtatta attgactatg
301gggatcaata tacagctcgc cagctgggca gtaggaaaga aaaaacgcta gccctaatta
361aaccagatgc aatatcaaag gctggagaaa taattgaaat aataaacaaa gctggattta
421ctataaccaa actcaaaatg atgatgcttt caaggaaaga agcattggat tttcatgtag
481atcaccagtc aagacccttt ttcaatgagc tgatccagtt tattacaact ggtcctatta
541ttgccatgga gattttaaga gatgatgcta tatgtgaatg gaaaagactg ctgggacctg
601caaactctgg agtggcacgc acagatgctt ctgaaagcat tagagccctc tttggaacag
661atggcataag aaatgcagcg catggccctg attcttttgc ttctgcggcc agagaaatgg
721agttgttttt tccttcaagt ggaggttgtg ggccggcaaa cactgctaaa tttactaatt
781gtaCCTGTTG CATTGTTAAA CCCCATGCTG TCAGTGAAGG ACTGTTGGGA AAGATCCTGA
841TGGCTATCCG AGATGCAGGT TTTGAAATCT CAGCTATGCA GATGTTCAAT ATGGATCGGG
901TTAATGTTGA GGAATTCTAT GAAGTTTATA AAGGAGTAGT GACCGAATAT CATGACATGG
961TGACAGAAAT GTATTCTGGC CCTTGTGTAG CAATGGAGAT TCAACAGAAT AATGCTACAA
1021AGACATTTCG AGAATTTTGT GGACCTGCTG ATCCTGAAAT TGCCCGGCAT TTACGCCCTG
1081GAACTCTCAG AGCAATCTTT GGTAAAACTA AGATCCAGAA TGCTGTTCAC TGTACTGATC
1141TGCCAGAGGA TGGCCTATTA GAGGTTCAAT ACTTCTTCAA GATCTTGGAT AATTACCCAA
1201CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1261ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1321TATCTTGTGG AAAGGACGAA CTCATTCTGA ACGTGCAGCA CGGACGCGTT AAGTCgacaa
1381tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)