Construct: ORF TRCN0000481291

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002293.1_s317c1
Derived from:
ccsbBroadEn_01523
DNA Barcode:
ACGCTTAGAATAAATTACATATGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SRSF4 (6429)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000481291
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6429 SRSF4 serine and arginine rich sp... NM_005626.5 100% 100%
2 human 6429 SRSF4 serine and arginine rich sp... XM_011541951.3 93.9% 93.9% 576_577ins90
3 mouse 57317 Srsf4 serine/arginine-rich splici... NM_020587.2 84.2% 87.6% (many diffs)
4 mouse 57317 Srsf4 serine/arginine-rich splici... XM_017320335.1 61.2% 63% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1548
ORF length:
1482
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcc gcgggtgtac atcggccgcc tgagctacca ggcccgggag cgcgatgtgg
121agcgcttctt taagggctac gggaagatcc tggaggtgga tctgaagaac ggatatggtt
181ttgtggagtt tgatgatctg cgtgatgcag atgatgctgt ttatgaactg aatggcaaag
241acctttgtgg tgagcgagta attgttgagc atgcccgcgg cccacggcga gatggcagtt
301acggttctgg acgcagtgga tatggttata gaagaagtgg ccgagataaa tatggccctc
361ctactcgcac agagtacaga cttattgtgg agaatttgtc aagtcggtgc agctggcaag
421acctaaagga ttatatgcgt caggcaggag aagtgactta tgcagatgct cacaagggac
481gcaaaaatga aggggtgatt gaatttgtat cttattctga tatgaaaaga gctttggaaa
541agttggatgg aactgaagtc aatgggagaa aaatcagatt agttgaagac aagccaggtt
601ccagacgacg ccggtcctac tccagaagcc ggagtcattc aaggtctcgc tctcgaagca
661gacattcccg taagagcaga agccgaagtg gcagcagcaa aagcagtcat tctaagagta
721gatctcggtc caggtcgggc tcccgctccc ggagcaagag ccggagccgg agccagagtc
781ggagccggag caagaaagag aaaagcagga gccccagcaa ggaaaagagc cgcagccgca
841gccatagcgc tggcaagagc cgcagcaaga gcaaagacca agctgaagag aagatccaaa
901acaatgacaa tgtcgggaaa cccaagagcc ggagtcctag caggcataaa agtaagagca
961aaagtcggag caggagtcag gagaggagag tggaggagga gaagcgaggg agtgtgagca
1021ggggcaggag ccaggagaag agcctccgcc agagtcggag ccggagcagg agcaaagggg
1081gCAGCAGGAG CCGGAGCAGG AGCCGCAGCA AGAGCAAGGA CAAGAGGAAG GGCAGGAAGA
1141GAAGCAGAGA GGAGAGCCGC AGTCGCAGTC GCAGCCGCAG CAAGAGTGAG AGGAGCAGAA
1201AGCGAGGCAG CAAGCGAGAC AGCAAGGCGG GCAGCAGCAA GAAGAAGAAG AAGGAAGACA
1261CTGACCGCTC CCAGTCCAGA TCTCCATCCC GCTCCGTGTC AAAGGAGCGG GAACATGCCA
1321AGTCTGAATC CAGCCAGAGG GAAGGTCGAG GAGAGAGTGA GAATGCTGGC ACCAATCAGG
1381AGACCCGGTC CAGGTCGAGA TCCAATTCCA AATCGAAACC AAACCTTCCA TCAGAATCAC
1441GCTCCAGATC AAAGTCAGCT TCAAAAACCC GATCTCGGTC CAAGTCTAGA TCCAGGTCTG
1501CTTCCAGATC GCCCTCCCGA TCTAGATCTA GGTCCCACTC AAGGTCCTAC CCAACTTTCT
1561TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
1621CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
1681GTGGAAAGGA CGAACGCTTA GAATAAATTA CATATGAACG CGTTAAGTCg acaatcaacc
1741tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)