Construct: ORF TRCN0000488239

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF021387.1_s317c1
DNA Barcode:
CGGAGTATGCGCATCATACGGTCA
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
MOXD1 (26002)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488239
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26002 MOXD1 monooxygenase DBH like 1 XM_017010714.2 92.9% 90.1% (many diffs)
2 human 26002 MOXD1 monooxygenase DBH like 1 NM_015529.4 88.3% 88.7% 1_207del;1839_1840insTGAAAGCT
3 mouse 59012 Moxd1 monooxygenase, DBH-like 1 NM_021509.5 74.5% 76.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1698
ORF length:
1632
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaacaat
61tgaccatggc gtccgccgac atcgtcgtgg gcggggtggc ccacgggcgg ccctacctcc
121aggattattt tacaaatgca aatagagagt tgaaaaaaga tgctcagcaa gattaccatc
181tagaatatgc catggaaaat agcacacaca caataattga atttaccaga gagctgcata
241catgtgacat aaatgacaag agtataacgg atagcactgt gagagtgatc tgggcctacc
301accatgaaga tgcaggagaa gctggtccca agtaccatga ctccaatagg ggcaccaaga
361gtttgcggtt attgaatcct gagaaaacta gtgtgctatc tacagcctta ccatactttg
421atctggtaaa tcaggacgtc cccatcccaa acaaagatac aacatattgg tgccaaatgt
481ttaagattcc tgtgttccaa gaaaagcatc atgtaataaa ggttgagcca gtgatacaga
541gaggccatga gagtctggtg caccacatcc tgctctatca gtgcagcaac aactttaacg
601acagcgttct ggagtccggc cacgagtgct atcaccccaa catgcccgat gcattcctca
661cctgtgaaac tgtgattttt gcctgggcta ttggtggaga gggcttttct tatccacctc
721atgttggatt atcccttggc actccattag atccgcatta tgtgctccta gaagtccatt
781atgataatcc cacttatgag gaaggcttaa tagataattc tggactgagg ttattttaca
841caatggatat aaggaaatat gatgctgggg tgattgaggc tggcctctgg gtgagcctct
901tccataccat ccctccaggg atgcctgagt tccagtctga gggtcactgc actttggagt
961gcctggaaga ggctctggaa gccgaaaagc caagtggaat tcatgtgttt gctgttcttc
1021tccatgctca cctggctggc agaggcatca ggctgcgtca ttttcgaaaa gggaaggaaa
1081tgaaattact tgcctatgat gatgattttg acttcaattt ccaggagttt cagtatctaa
1141aggaagaaca aacaatctta ccaggagata acctaattac tgagtgtcgc tacaacacga
1201aagatagagc tgagatgact tggggaggac taagcaccag gagtgaaatg tgtctctcat
1261accttcttta ttacccaaga attaatctta ctcgatgtgc aagtattcca gacattatgg
1321aacaacttca gttcattggg gttaaggaga tctacagacc agtcacgacc tggCCTTTCA
1381TTATCAAAAG TCCCAAGCAA TATAAAAACC TTTCTTTCAT GGATGCTATG AATAAGTTTA
1441AATGGACTAA AAAGGAAGGT CTCTCCTTCA ACAAGCTGGT CCTCAGCCTG CCAGTGAATG
1501TGAGATGTTC CAAGACAGAC AATGCTGAGT GGTCGATTCA AGGAATGACA GCATTACCTC
1561CAGATATAGA AAGACCCTAT AAAGCAGAAC CTTTGGTGTG TGGCACGTCT TCTTCCTCTT
1621CCCTGCACAG AGATTTCTCC ATCAACTTGC TTGTTTGCCT TCTGCTACTC AGCTGCACGC
1681TGAGCACCAA GAGCTTGTGA AAGCTTGACC CAGCTTTCTT GTACAAAGTG GTTGATATCG
1741GTAAGCCTAT CCCTAACCCT CTCCTCGGTC TCGATTCTAC GTAGTAATGA ACTAGTCCGT
1801AACTTGAAAG TATTTCGATT TCTTGGCTTT ATATATCTTG TGGAAAGGAC GACGGAGTAT
1861GCGCATCATA CGGTCAACGC GTTAAGTCga caatcaacct ctggattaca aaatttgtga
1921aagatt

Download FASTA (ORF) (Full)