Construct: ORF TRCN0000488773

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF020621.1_s317c1
DNA Barcode:
GTGAGATCGTGGTGTCATCTTGTA
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Has stop codon in insert

Originally Annotated References:

Gene:
NPR2 (4882)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000488773
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4882 NPR2 natriuretic peptide receptor 2 NM_003995.3 97.7% 97.7% 1814_1885del
2 human 4882 NPR2 natriuretic peptide receptor 2 XM_005251478.3 97.4% 97.4% 1436_1444delGTCCTTACA;1823_1894del
3 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447557.1 93% 92.9% 1814_1885del;2048_2206del
4 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447556.1 92.7% 92.6% 1436_1444delGTCCTTACA;1823_1894del;2057_2215del
5 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447558.1 62.9% 62.8% (many diffs)
6 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447561.1 53% 53% 0_1ins1404;410_481del
7 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447560.1 50.4% 50.3% 0_1ins1404;410_481del;644_802del
8 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447559.1 50.3% 50.2% (many diffs)
9 mouse 230103 Npr2 natriuretic peptide receptor 2 NM_173788.4 90.1% 96.3% (many diffs)
10 mouse 230103 Npr2 natriuretic peptide receptor 2 NM_001355466.1 87.7% 93.9% (many diffs)
11 mouse 230103 Npr2 natriuretic peptide receptor 2 XR_390318.4 42.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
72
ORF end:
3141
ORF length:
3069
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcac catggcgctg ccatcacttc tgctgttggt ggcagccctg gcaggtgggg
121tgcgtcctcc cggggcgcgg aacctgacgc tggcggtggt gctgccagaa cacaacctga
181gctatgcctg ggcctggcca cgggtgggac ccgctgtggc actagctgtg gaggctctgg
241gccgggcact gcccgtggac ctgcggtttg tcagctccga actggaaggc gcctgctctg
301agtacctggc accgctgagc gctgtggacc tcaagctgta ccatgacccc gacctgctgt
361taggtcccgg ttgcgtgtac cctgctgcct ctgtggcccg ctttgcctcc cactggcgcc
421ttcccctgct gactgcgggt gctgtggcct ctggtttttc ggctaagaat gaccattatc
481gtaccctggt tcgcactggc ccctctgctc ccaagctggg tgagtttgtg gtgacactac
541acgggcactt caattggact gcccgtgctg ccttgctgta cctggatgct cgcacagatg
601accggcctca ctacttcacc atcgagggcg tctttgaggc cctgcagggc agcaacctca
661gtgtgcagca ccaggtgtat gcccgagagc cagggggccc cgagcaggcc acccacttca
721tccgggccaa cgggcgcatt gtgtatatct gcggccctct ggagatgctg catgagatcc
781tgcttcaggc ccagagggag aatctgacca atggggatta tgtcttcttt tacctggatg
841tctttgggga gagtctccgt gcaggcccca cacgtgctac aggccggccc tggcaggaca
901atcgcacccg ggaacaggcc caggccctca gagaggcctt tcagactgta ttggtgatca
961cgtaccgaga acccccaaat cctgagtatc aggaattcca gaatcgtctg ctgataagag
1021cccgggaaga ctttggtgtg gagctgggcc cttccctgat gaacctcatc gctggctgct
1081tctatgatgg gatcctgcta tatgctgaag tcctgaatga gacaatacag gaaggaggca
1141cccgggagga tggacttcga attgtggaaa agatgcaggg acgaagatat cacggtgtaa
1201ctgggctggt tgtcatggac aagaacaatg accgagagac tgactttgtc ctctgggcca
1261tgggagacct ggattctggg gactttcagc ctgcagccca ctactcggga gctgagaagc
1321agatttggtg gacgggacgg cctattccct gggtgaaggg ggctcctccc tcggacaatc
1381ccccctgtgc ctttgacttg gacgacccat cctgtgataa aactccactt tcaaccctgg
1441caattgtggc tctgggcaca ggaatcacct tcatcatgtt tggtgtttcc agcttcctaa
1501ttttccgaaa gctgatgctg gagaaggagc tggctagcat gttgtggcgt attcgctggg
1561aagaactgca gtttggcaac tcagagcgtt atcacaaagg tgcaggcagt cgcctcacac
1621tgtcgctgcg gggatccagt tacggctcgc tcatgacagc ccatgggaaa taccagatct
1681ttgccaacac cggtcacttc aagggaaatg ttgtcgccat caaacatgtg aataagaagc
1741gcattgagct gacccggcag gttctgtttg aactcaaaca tatgagagat gttcagttca
1801accatctcac tcgcttcatt ggcgcctgca tagaccctcc caacatttgc attgtcactg
1861aatactgtcc tcgtgggagt ttacagggca tggcctttct ccacaacagc attatttcat
1921cgcatgggag tctcaagtcc tccaactgtg tggtggatag tcgttttgtg ctcaaaatca
1981cagactatgg cctggccagc ttccgatcaa ctgctgaacc tgatgacagc catgccctct
2041atgccaagaa gctgtggact gccccagaac tgctcagtgg gaaccccttg ccaaccacag
2101gcatgcagaa ggctgacgtc tatagctttg ggatcatcct gcaggagata gcacttcgca
2161gtggtccttt ctacttggag ggcctggacc tcagccccaa agagattgtc cagaaggtac
2221gaaatggtca gcggccatat ttccggccaa gcattgaccg gacccaactg aatgaagagc
2281tagttttgct gatggagcga tgttgggctc aggacccagc tgagcggcca gactttggac
2341agattaaggg cttcattcgg cgctttaaca aggagggtgg caccagcata ttggacaacc
2401tcctgctgcg catggaacag tatgccaata acttggagaa gctggtggag gaacgcacac
2461aggcctatct ggaggaaaaa cgcaaggctg aagctctgct ctaccaaatc ctaccccatt
2521cagtggcaga gcagttaaaa cggggagaga ctgtacaggc tgaggccttt gacagtgtta
2581ccatctactt cagtgacatt gttggcttca cagcattgtc agcagagagc acccccatgc
2641aggtagtgac acttcttaat gacctgtata cctgctttga tgccataatt gacaactttg
2701atgtctacaa ggtggagacg attggggatg cttacatggt ggtatctggc ctcccaggcc
2761gaaatggtca acgccatgca ccagaaattg ctcGTATGGC CCTAGCATTA CTAGATGCAG
2821TTTCTTCCTT TCGCATCCGC CACCGACCCC ATGACCAGCT GAGGCTACGC ATAGGGGTCC
2881ATACTGGGCC AGTCTGTGCT GGGGTTGTTG GCCTGAAGAT GCCCCGTTAT TGTCTTTTTG
2941GAGACACAGT GAACACTGCT TCTCGAATGG AGTCTAATGG TCAAGCGCTG AAGATCCATG
3001TCTCCTCTAC CACCAAGGAT GCCCTAGATG AGCTAGGATG CTTCCAGCTA GAGCTTCGGG
3061GGGATGTGGA AATGAAGGGA AAAGGAAAGA TGCGAACATA CTGGCTCTTA GGAGAGCGGA
3121AAGGACCTCC TGGACTCCTG TAGAACCCAG CTTTCTTGTA CAAAGTGGTT GATATCGGTA
3181AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
3241TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAG TGAGATCGTG
3301GTGTCATCTT GTAACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
3361att

Download FASTA (ORF) (Full)

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