Construct: ORF TRCN0000489204

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019477.1_s317c1
DNA Barcode:
AGCGCCGTTGGGCGTACGATATCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ACKR3 (57007)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000489204
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57007 ACKR3 atypical chemokine receptor 3 NM_020311.3 99.8% 99.7% 162C>T;1086_1087insG
2 human 57007 ACKR3 atypical chemokine receptor 3 XM_005246097.3 99.8% 99.7% 162C>T;1086_1087insG
3 human 57007 ACKR3 atypical chemokine receptor 3 XM_005246098.3 99.8% 99.7% 162C>T;1086_1087insG
4 human 57007 ACKR3 atypical chemokine receptor 3 XM_017004516.2 99.8% 99.7% 162C>T;1086_1087insG
5 mouse 12778 Ackr3 atypical chemokine receptor 3 NM_001271607.1 88.5% 92.5% (many diffs)
6 mouse 12778 Ackr3 atypical chemokine receptor 3 NM_007722.4 88.5% 92.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
75
ORF end:
1164
ORF length:
1089
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcttcgc caccatggat ctgcatctct tcgactactc agagccaggg aacttctcgg
121acatcagctg gccatgcaac agcagcgact gcatcgtggt ggacacggtg atgtgtccca
181acatgcccaa caaaagcgtc ctgctctaca cgctctcctt catttacatt ttcattttcg
241tcatcggcat gattgccaac tccgtggtgg tctgggtgaa tatccaggcc aagaccacag
301gctatgacac gcactgctac atcttgaacc tggccattgc cgacctgtgg gttgtcctca
361ccatcccagt ctgggtggtc agtctcgtgc agcacaacca gtggcccatg ggcgagctca
421cgtgcaaagt cacacacctc atcttctcca tcaacctctt cggcagcatt ttcttcctca
481cgtgcatgag cgtggaccgc tacctctcca tcacctactt caccaacacc cccagcagca
541ggaagaagat ggtacgccgt gtcgtctgca tcctggtgtg gctgctggcc ttctgcgtgt
601ctctgcctga cacctactac ctgaagaccg tcacgtctgc gtccaacaat gagacctact
661gccggtcctt ctaccccgag cacagcatca aggagtggct gatcggcatg gagctggtct
721ccgttgtctt gggctttgcc gttcccttct ccattatcgc tgtcttctac ttcctgctgg
781ccagagccat ctcggcgtcc agtgaccagg agaagcacag cagccggaag atcatcttct
841ccTACGTGGT GGTCTTCCTT GTCTGCTGGC TGCCCTACCA CGTGGCGGTG CTGCTGGACA
901TCTTCTCCAT CCTGCACTAC ATCCCTTTCA CCTGCCGGCT GGAGCACGCC CTCTTCACGG
961CCCTGCATGT CACACAGTGC CTGTCGCTGG TGCACTGCTG CGTCAACCCT GTCCTCTACA
1021GCTTCATCAA TCGCAACTAC AGGTACGAGC TGATGAAGGC CTTCATCTTC AAGTACTCGG
1081CCAAAACAGG GCTCACCAAG CTCATCGATG CCTCCAGAGT CTCAGAGACG GAGTACTCTG
1141CCTTGGAGCA GAGCACCAAA GACCCAGCTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1201CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1261AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAAGCG CCGTTGGGCG
1321TACGATATCT ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)