Construct: ORF TRCN0000489295
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF019943.1_s317c1
- DNA Barcode:
- TTTCACGAGATGAAAAACTTGAAA
- Epitope Tag:
- V5
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ESRRG (2104)
Vector Information:
- Vector Backbone:
- pLX_317
- Pol II Cassette 1:
- SV40-PuroR
- Pol II Cassette 2:
- EF1a-TRCN0000489295
- Selection Marker:
- PuroR
- Visible Reporter:
- n/a
- Epitope Tag:
- V5
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509274.1 | 99.9% | 99.7% | 1326_1327insG |
| 2 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509275.1 | 99.9% | 99.7% | 1326_1327insG |
| 3 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509276.1 | 99.9% | 99.7% | 1326_1327insG |
| 4 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509277.1 | 99.9% | 99.7% | 1326_1327insG |
| 5 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509278.1 | 99.9% | 99.7% | 1326_1327insG |
| 6 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509279.1 | 99.9% | 99.7% | 1326_1327insG |
| 7 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509280.2 | 99.9% | 99.7% | 1326_1327insG |
| 8 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000631.2 | 99.9% | 99.7% | 1326_1327insG |
| 9 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000632.2 | 99.9% | 99.7% | 1326_1327insG |
| 10 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000633.1 | 99.9% | 99.7% | 1326_1327insG |
| 11 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000634.2 | 99.9% | 99.7% | 1326_1327insG |
| 12 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000635.1 | 99.9% | 99.7% | 1326_1327insG |
| 13 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000636.2 | 99.9% | 99.7% | 1326_1327insG |
| 14 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000637.1 | 99.9% | 99.7% | 1326_1327insG |
| 15 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453959.1 | 99.9% | 99.7% | 1326_1327insG |
| 16 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453960.1 | 99.9% | 99.7% | 1326_1327insG |
| 17 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509271.2 | 98.8% | 98.6% | 1_15del;1341_1342insG |
| 18 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000630.1 | 98.8% | 98.6% | 1_15del;1341_1342insG |
| 19 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001134285.3 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 20 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243509.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 21 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243510.3 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 22 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243511.3 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 23 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243512.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 24 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243513.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 25 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243514.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 26 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243515.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 27 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243519.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 28 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350122.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 29 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350123.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 30 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350124.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 31 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001350125.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 32 | human | 2104 | ESRRG | estrogen related receptor g... | NM_206594.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 33 | human | 2104 | ESRRG | estrogen related receptor g... | NM_206595.3 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 34 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000638.2 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 35 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000639.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 36 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000641.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 37 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000644.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 38 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000645.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 39 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453975.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 40 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453979.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 41 | human | 2104 | ESRRG | estrogen related receptor g... | XM_024453980.1 | 98.3% | 97.9% | 631_632ins21;1305_1306insG |
| 42 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000628.1 | 95.8% | 95.6% | 1_57del;1383_1384insG |
| 43 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243518.2 | 93.9% | 93.8% | 1_84del;1410_1411insG |
| 44 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509267.1 | 93.9% | 93.8% | 1_84del;1410_1411insG |
| 45 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509268.2 | 93.9% | 93.8% | 1_84del;1410_1411insG |
| 46 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509269.2 | 93.9% | 93.8% | 1_84del;1410_1411insG |
| 47 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001438.4 | 93.4% | 93.1% | 1_69del;700_701ins21;1374_1375insG |
| 48 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509265.3 | 92.5% | 92.4% | 1_105del;1431_1432insG |
| 49 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000621.2 | 92.5% | 92.4% | 1_105del;1431_1432insG |
| 50 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000622.1 | 92.5% | 92.4% | 1_105del;1431_1432insG |
| 51 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000623.2 | 92.5% | 92.4% | 1_105del;1431_1432insG |
| 52 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000624.2 | 92.5% | 92.4% | 1_105del;1431_1432insG |
| 53 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000625.1 | 92.5% | 92.4% | 1_105del;1431_1432insG |
| 54 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000626.1 | 92.4% | 92.1% | 1_84del;715_716ins21;1389_1390insG |
| 55 | human | 2104 | ESRRG | estrogen related receptor g... | XM_017000627.1 | 92.4% | 92.1% | 1_84del;715_716ins21;1389_1390insG |
| 56 | human | 2104 | ESRRG | estrogen related receptor g... | XM_011509266.3 | 91.1% | 90.7% | 1_105del;736_737ins21;1410_1411insG |
| 57 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243507.2 | 89.5% | 89.1% | 400_401ins117;514_515ins21;1188_1189insG |
| 58 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243506.2 | 61.7% | 61.3% | 0_1ins486;145_146ins21;819_820insG |
| 59 | human | 2104 | ESRRG | estrogen related receptor g... | NM_001243505.2 | 46.7% | 46.7% | 0_1ins705;621_622insG |
| 60 | mouse | 26381 | Esrrg | estrogen-related receptor g... | NM_001243792.1 | 91.6% | 97.9% | (many diffs) |
| 61 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497164.3 | 91.6% | 97.9% | (many diffs) |
| 62 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497165.3 | 91.6% | 97.9% | (many diffs) |
| 63 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497167.3 | 91.6% | 97.9% | (many diffs) |
| 64 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_006497170.1 | 91.6% | 97.9% | (many diffs) |
| 65 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238914.2 | 89.2% | 95.3% | (many diffs) |
| 66 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238915.2 | 89.2% | 95.3% | (many diffs) |
| 67 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238916.2 | 89.2% | 95.3% | (many diffs) |
| 68 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238917.2 | 89.2% | 95.3% | (many diffs) |
| 69 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238918.2 | 89.2% | 95.3% | (many diffs) |
| 70 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238919.2 | 89.2% | 95.3% | (many diffs) |
| 71 | mouse | 26381 | Esrrg | estrogen-related receptor g... | XM_011238920.2 | 89.2% | 95.3% | (many diffs) |
| 72 | mouse | 26381 | Esrrg | estrogen-related receptor g... | NM_011935.3 | 87.1% | 93.1% | (many diffs) |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 72
- ORF end:
- 1401
- ORF length:
- 1329
- Sequence:
-
1 tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag 61 caggcttcac catgtcaaac aaagatcgac acattgattc cagctgttcg tccttcatca 121 agacggaacc ttccagccca gcctccctga cggacagcgt caaccaccac agccctggtg 181 gctcttcaga cgccagtggg agctacagtt caaccatgaa tggccatcag aacggacttg 241 actcgccacc tctctaccct tctgctccta tcctgggagg tagtgggcct gtcaggaaac 301 tgtatgatga ctgctccagc accattgttg aagatcccca gaccaagtgt gaatacatgc 361 tcaactcgat gcccaagaga ctgtgtttag tgtgtggtga catcgcttct gggtaccact 421 atggggtagc atcatgtgaa gcctgcaagg cattcttcaa gaggacaatt caaggcaata 481 tagaatacag ctgccctgcc acgaatgaat gtgaaatcac aaagcgcaga cgtaaatcct 541 gccaggcttg ccgcttcatg aagtgtttaa aagtgggcat gctgaaagaa ggggtgcgtc 601 ttgacagagt acgtggaggt cggcagaagt acaagcgcag gatagatgcg gagaacagcc 661 catacctgaa ccctcagctg gttcagccag ccaaaaagcc attgctctgg tctgatcctg 721 cagataacaa gattgtctca catttgttgg tggctgaacc ggagaagatc tatgccatgc 781 ctgaccctac tgtccccgac agtgacatca aagccctcac tacactgtgt gacttggccg 841 accgagagtt ggtggttatc attggatggg cgaagcatat tccaggcttc tccacgctgt 901 ccctggcgga ccagatgagc cttctgcaga gtgcttggat ggaaattttg atccttggtg 961 tcgtataccg gtctctttcg tttgaggatg aacttgtcta tgcagacgat tatataatgg 1021 acgaagacca gtccaaatta gcaggccttc ttgatcTAAA TAATGCTATC CTGCAGCTGG 1081 TAAAGAAATA CAAGAGCATG AAGCTGGAAA AAGAAGAATT TGTCACCCTC AAAGCTATAG 1141 CTCTTGCTAA TTCAGACTCC ATGCACATAG AAGATGTTGA AGCCGTTCAG AAGCTTCAGG 1201 ATGTCTTACA TGAAGCGCTG CAGGATTATG AAGCTGGCCA GCACATGGAA GACCCTCGTC 1261 GAGCTGGCAA GATGCTGATG ACACTGCCAC TCCTGAGGCA GACCTCTACC AAGGCCGTGC 1321 AGCATTTCTA CAACATCAAA CTAGAAGGCA AAGTCCCAAT GCACAAACTT TTTTTGGAAA 1381 TGTTGGAGGC CAAGGTCGAC CCAGCTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA 1441 TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA 1501 GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGATTTCACG AGATGAAAAA 1561 CTTGAAAACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt