Construct: ORF TRCN0000492060

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019823.2_s317c1
DNA Barcode:
CAACGATTTTCCCTCCTTGATTTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
AKR1B10 (57016)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000492060
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57016 AKR1B10 aldo-keto reductase family ... NM_020299.5 99.7% 99.3% 937A>G;948_949insG
2 human 441282 AKR1B15 aldo-keto reductase family ... NM_001367821.1 95.1% 91.4% (many diffs)
3 human 57016 AKR1B10 aldo-keto reductase family ... XM_011516416.1 87.4% 87% 230_231ins117;820A>G;831_832insG
4 human 441282 AKR1B15 aldo-keto reductase family ... NM_001080538.3 85.1% 78.5% (many diffs)
5 human 441282 AKR1B15 aldo-keto reductase family ... NM_001367820.1 85.1% 78.5% (many diffs)
6 human 441282 AKR1B15 aldo-keto reductase family ... XM_017012224.2 85.1% 78.5% (many diffs)
7 human 57016 AKR1B10 aldo-keto reductase family ... XR_927491.1 57.8% (many diffs)
8 human 57016 AKR1B10 aldo-keto reductase family ... XM_011516417.2 48.9% 47.7% (many diffs)
9 human 441282 AKR1B15 aldo-keto reductase family ... NM_001367822.1 30.9% 26% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1020
ORF length:
951
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61caggcaccat ggccacgttt gtggagctca gtaccaaagc caagatgccc attgtgggcc
121tgggcacttg gaagtctcct cttggcaaag tgaaagaagc agtgaaggtg gccattgatg
181caggatatcg gcacattgac tgtgcctatg tctatcagaa tgaacatgaa gtgggggaag
241ccatccaaga gaagatccaa gagaaggctg tgaagcggga ggacctgttc atcgtcagca
301agttgtggcc cactttcttt gagagacccc ttgtgaggaa agcctttgag aagaccctca
361aggacctgaa gctgagctat ctggacgtct atcttattca ctggccacag ggattcaagt
421ctggggatga ccttttcccc aaagatgata aaggtaatgc catcggtgga aaagcaacgt
481tcttggatgc ctgggaggcc atggaggagc tggtggatga ggggctggtg aaagcccttg
541gggtctccaa tttcagccac ttccagatcg agaagctctt gaacaaacct ggactgaaat
601ataaaccagt gactaaccag gttgagtgtc acccataCCT CACACAGGAG AAACTGATCC
661AGTACTGCCA CTCCAAGGGC ATCACCGTTA CGGCCTACAG CCCCCTGGGC TCTCCGGATA
721GACCTTGGGC CAAGCCAGAA GACCCTTCCC TGCTGGAGGA TCCCAAGATT AAGGAGATTG
781CTGCAAAGCA CAAAAAAACC GCAGCCCAGG TTCTGATCCG TTTCCATATC CAGAGGAATG
841TGATTGTCAT CCCCAAGTCT GTGACACCAG CACGCATTGT TGAGAACATT CAGGTCTTTG
901ACTTTAAATT GAGTGATGAG GAGATGGCAA CCATACTCAG CTTCAACAGA AACTGGAGGG
961CCTGTAACGT GTTGCAATCC TCTCATTTGG AAGACTATCC CTTCGATGCA GAATATGACC
1021CAGCTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1081TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1141ATATATCTTG TGGAAAGGAC GACAACGATT TTCCCTCCTT GATTTAACGC GTTAAGTCga
1201caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)