Construct: ORF TRCN0000492273

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010716.1_s317c1
Derived from:
ccsbBroadEn_14192
DNA Barcode:
CTACTATATTAGCGCGTGCACTCC
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MOB1A (55233)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000492273
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55233 MOB1A MOB kinase activator 1A NM_018221.5 99.8% 98.6% 637delT
2 human 55233 MOB1A MOB kinase activator 1A NM_001317110.2 99.3% 98.1% 14_15insCAG;634delT
3 human 55233 MOB1A MOB kinase activator 1A NM_001317111.1 82.9% 81% (many diffs)
4 human 55233 MOB1A MOB kinase activator 1A XM_024452973.1 82.9% 81% (many diffs)
5 human 92597 MOB1B MOB kinase activator 1B NM_173468.4 79.2% 94.4% (many diffs)
6 human 92597 MOB1B MOB kinase activator 1B NM_001244766.2 76.5% 89.2% (many diffs)
7 human 92597 MOB1B MOB kinase activator 1B XM_005265709.2 76.5% 89.2% (many diffs)
8 human 92597 MOB1B MOB kinase activator 1B XM_011532412.2 71.2% 82.9% (many diffs)
9 human 55233 MOB1A MOB kinase activator 1A NM_001317112.2 63.6% 63.8% 411A>T;414_414delTins234
10 human 92597 MOB1B MOB kinase activator 1B NM_001244767.2 54% 61.7% (many diffs)
11 mouse 232157 Mob1a MOB kinase activator 1A NM_145571.2 92.9% 98.6% (many diffs)
12 mouse 232157 Mob1a MOB kinase activator 1A XM_006505969.3 92.4% 98.1% (many diffs)
13 mouse 68473 Mob1b MOB kinase activator 1B NM_026735.2 78.9% 94.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
714
ORF length:
648
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag cttcctcttc agcagccgct cttctaaaac attcaaacca aagaagaata
121tccctgaagg atctcatcag tatgaactct taaaacatgc agaagcaact ctaggaagtg
181ggaatctgag acaagctgtt atgttgcctG AGGGAGAGGA TCTCAATGAA TGGATTGCTG
241TGAACACTGT GGATTTCTTT AACCAGATCA ACATGTTATA TGGAACTATT ACAGAATTCT
301GCACTGAAGC AAGCTGTCCA GTCATGTCTG CAGGTCCGAG ATATGAATAT CACTGGGCAG
361ATGGTACTAA TATTAAAAAG CCAATCAAAT GTTCTGCACC AAAATACATT GACTATTTGA
421TGACTTGGGT TCAAGATCAG CTTGATGATG AAACTCTTTT TCCTTCTAAG ATTGGTGTCC
481CATTTCCCAA AAACTTTATG TCTGTGGCAA AGACTATTCT AAAGCGTCTG TTCAGGGTTT
541ATGCCCATAT TTATCACCAG CACTTTGATT CTGTGATGCA GCTGCAAGAG GAGGCCCACC
601TCAACACCTC CTTTAAGCAC TTTATTTTCT TTGTTCAGGA GTTTAATCTG ATTGATAGGC
661GTGAGCTGGC ACCTCTTCAA GAATTAATAG AGAAACTTGG ACAAAAGACA GATACCCAAC
721TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA
781TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT
841ATCTTGTGGA AAGGACGACT ACTATATTAG CGCGTGCACT CCACGCGTTA AGTCgacaat
901caacctctgg attacaaaat ttgtgaaaga tt

Download FASTA (ORF) (Full)