Construct: ORF ccsbBroad304_01470

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012764.1_s304c1, BRDN0000403584
Derived from:
ccsbBroadEn_01470
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RXRG (6258)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_01470
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6258 RXRG retinoid X receptor gamma NM_006917.5 100% 100%
2 human 6258 RXRG retinoid X receptor gamma NM_001256570.1 73.4% 73.4% 0_1ins369
3 human 6258 RXRG retinoid X receptor gamma NM_001256571.2 73.4% 73.4% 0_1ins369
4 mouse 20183 Rxrg retinoid X receptor gamma NM_009107.3 90.2% 98.2% (many diffs)
5 mouse 20183 Rxrg retinoid X receptor gamma NM_001159731.1 66% 72.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1455
ORF length:
1389
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgta tggaaattat tctcacttca tgaagtttcc cgcaggctat ggaggctccc
121ctggccacac tggctctaca tccatgagcc catcagcagc cttgtccaca gggaagccaa
181tggacagcca ccccagctac acagataccc cagtgagtgc cccacggact ctgagtgcag
241tggggacccc cctcaatgcc ctgggctctc catatcgagt catcacctct gccatgggcc
301caccctcagg agcacttgca gcgcctccag gaatcaactt ggttgcccca cccagctctc
361agctaaatgt ggtcaacagt gtcagcagtt cagaggacat caagccctta ccagggcttc
421ccgggattgg aaacatgaac tacccatcca ccagccccgg atctctggtt aaacacatct
481gtgccatctg tggagacaga tcctcaggaa agcactacgg ggtatacagt tgtgaaggct
541gcaaagggtt cttcaagagg acgataagga aggacctcat ctacacgtgt cgggataata
601aagactgcct cattgacaag cgtcagcgca accgctgcca gtactgtcgc tatcagaagt
661gccttgtcat gggcatgaag agggaagctg tgcaagaaga aagacagagg agccgagagc
721gagctgagag tgaggcagaa tgtgctacca gtggtcatga agacatgcct gtggagagga
781ttctagaagc tgaacttgct gttgaaccaa agacagaatc ctatggtgac atgaatatgg
841agaactcgac aaatgaccct gttaccaaca tatgtcatgc tgctgacaag cagcttttca
901ccctcgttga atgggccaag cgtattcccc acttctctga cctcaccttg gaggaccagg
961tcattttgct tcgggcaggg tggaatgaat tgctgattgc ctctttctcc caccgctcag
1021tttccgtgca ggatggcatc cttctggcca cgggtttaca tgtccaccgg agcagtgccc
1081acagtgctgg ggtcggctcc atctttgaca gagtcctaac tgagctggtt tccaaaatga
1141aagacatgca gatggacaag tcggaactgg gatgcctgcg agccattgta ctctttaacc
1201cagatgccaa gggcctgtcc aacccctctg aggtggagac tctgcgagag aaggtttatg
1261ccacccttga ggcctacacc aagcagaagt atccggaaca gccaggcagg tttgccaagc
1321tgctgctgcg cctcccagct ctgcgttcca ttggcttgaa atgcctggag cacctcttct
1381tcttcaagct catcggggac acccccattg acaccttcct catggagatg ttggagaccc
1441cgctgcagat cacctgccca actttcttgt acaaagtggt tggtaagcct atccctaacc
1501ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
1561cgacaatcaa cctctggatt a

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