Construct: ORF ccsbBroad304_02425

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005861.1_s304c1, BRDN0000399388
Derived from:
ccsbBroadEn_02425
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDIPT (10423)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02425
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10423 CDIPT CDP-diacylglycerol--inosito... NM_006319.5 100% 100%
2 human 10423 CDIPT CDP-diacylglycerol--inosito... NM_001286585.2 78.8% 78.8% 42_43ins135
3 human 10423 CDIPT CDP-diacylglycerol--inosito... XM_005255038.4 78.8% 70.8% (many diffs)
4 human 10423 CDIPT CDP-diacylglycerol--inosito... NM_001286586.2 69.4% 69.4% 0_1ins195
5 mouse 52858 Cdipt CDP-diacylglycerol--inosito... NM_026638.3 89.5% 96.2% (many diffs)
6 mouse 52858 Cdipt CDP-diacylglycerol--inosito... XM_006508022.2 86.6% 93.1% (many diffs)
7 mouse 52858 Cdipt CDP-diacylglycerol--inosito... NM_001347656.1 67.8% 64.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
705
ORF length:
639
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc agacgaaaat atcttcctgt tcgtgcccaa cctcatcggt tatgcccgga
121ttgtcttcgc catcatttct ttctacttca tgccctgctg ccccctcacg gcctcctcct
181tctacctgct cagcggcctg ctggacgctt tcgatggaca cgctgctcgc gctcttaatc
241aaggaacccg gtttggggcc atgctggaca tgctgacgga ccgctgctcc accatgtgcc
301tgttggtcaa cctggccctg ctgtaccctg gagccacgct gttcttccaa atcagcatga
361gtttggatgt ggccagtcac tggctgcacc tccacagttc tgtggtccga ggcagtgaga
421gtcacaagat gatcgacttg tccgggaatc cggtgcttcg gatctactac acctcgaggc
481ctgctctgtt caccttgtgt gctgggaatg agctcttcta ctgcctcctc tacctgttcc
541atttctctga gggaccttta gttggctctg tgggactgtt ccggatgggc ctctgggtca
601ctgcccccat cgccttgctg aagtcgctca tcagcgtcat ccacctgatc acggccgccc
661gcaacatggc tgccctggac gcagcagacc gcgccaagaa gaagtgccca actttcttgt
721acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
781gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)