Construct: ORF ccsbBroad304_02629

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004774.1_s304c1, BRDN0000462013
Derived from:
ccsbBroadEn_02629
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GLMN (11146)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02629
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 11146 GLMN glomulin, FKBP associated p... NM_053274.3 100% 100%
2 human 11146 GLMN glomulin, FKBP associated p... XM_011540546.2 100% 100%
3 human 11146 GLMN glomulin, FKBP associated p... NM_001319683.1 97.6% 97.6% 1097_1098ins42
4 human 11146 GLMN glomulin, FKBP associated p... XM_017000137.1 94.7% 94.7% 1_99del
5 human 11146 GLMN glomulin, FKBP associated p... XM_017000141.1 93% 91.7% (many diffs)
6 human 11146 GLMN glomulin, FKBP associated p... XM_005270401.3 92.9% 92.9% 39_40ins126
7 human 11146 GLMN glomulin, FKBP associated p... XM_017000138.1 92.5% 92.5% 1_99del;1196_1197ins42
8 human 11146 GLMN glomulin, FKBP associated p... XM_017000139.1 88.1% 86.9% (many diffs)
9 human 11146 GLMN glomulin, FKBP associated p... XM_017000140.1 88% 88% 1_99del;138_139ins126
10 human 11146 GLMN glomulin, FKBP associated p... NR_135089.1 83.1% 1_115del;1327_1328ins85;1813_1957del
11 human 11146 GLMN glomulin, FKBP associated p... XM_006710309.2 71.8% 71.8% 0_1ins501
12 human 11146 GLMN glomulin, FKBP associated p... XM_017000142.1 69.5% 69.5% 0_1ins501;596_597ins42
13 human 11146 GLMN glomulin, FKBP associated p... XM_017000143.1 69.5% 69.5% 0_1ins501;596_597ins42
14 human 11146 GLMN glomulin, FKBP associated p... XR_002959249.1 65.6% (many diffs)
15 human 11146 GLMN glomulin, FKBP associated p... XR_002959248.1 57.6% (many diffs)
16 human 11146 GLMN glomulin, FKBP associated p... XM_017000144.1 56.7% 56.7% 0_1ins771
17 mouse 170823 Glmn glomulin, FKBP associated p... NM_001161738.1 85.8% 85.6% (many diffs)
18 mouse 170823 Glmn glomulin, FKBP associated p... NM_133248.2 85.8% 85.6% (many diffs)
19 mouse 170823 Glmn glomulin, FKBP associated p... XM_006534800.3 85.8% 85.6% (many diffs)
20 mouse 170823 Glmn glomulin, FKBP associated p... NM_001161739.1 77.1% 76.2% (many diffs)
21 mouse 170823 Glmn glomulin, FKBP associated p... XR_001784631.1 67.1% (many diffs)
22 mouse 170823 Glmn glomulin, FKBP associated p... XM_011249410.2 42.7% 42.4% (many diffs)
23 mouse 170823 Glmn glomulin, FKBP associated p... XM_017320694.1 42.7% 42.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1848
ORF length:
1782
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc tgtagaggaa cttcagtcta taataaagag atgtcaaatc ctagaagagc
121aagactttaa agaagaggat tttggcctat ttcagttagc tgggcaaaga tgcatagaag
181aagggcacac agaccagcta ttagaaatta ttcaaaatga aaagaataag gtcatcatca
241agaatatggg ctggaatctc gttggtcctg ttgttcgatg ccttttgtgt aaagataaag
301aggatagtaa aagaaaagtt tattttttga tctttgattt attggtaaag ttatgcaatc
361caaaggaatt attgttgggt ttgcttgaac tgattgaaga gccctctgga aaacagatat
421cccaaagtat tcttcttttg cttcagccat tacaaacagt gattcagaaa cttcataaca
481aggcatattc aattggatta gcattgtcta ccctttggaa tcagctatct cttcttcctg
541ttccatactc aaaagaacaa atacaaatgg atgactatgg cctttgtcag tgttgcaagg
601ccttaataga gttcactaag ccttttgtgg aagaagtcat tgataacaaa gaaaactcac
661tggaaaatga aaagttaaag gatgaattac tgaaattttg tttcaaaagc ttgaaatgcc
721ctttgctgac agcacaattc tttgaacagt ctgaagaagg tggaaatgat cctttcaggt
781attttgcatc agaaataata ggttttttat cagcaattgg acaccctttc cccaaaatga
841tttttaatca tggaaggaaa aagagaactt ggaattacct tgaatttgaa gaagaagaaa
901ataaacagtt agcagactca atggcttctc tggcatatct agtatttgta cagggcatcc
961atattgatca gcttccaatg gtcttaagcc cattgtacct tttgcagttt aatatggggc
1021acattgaagt ctttttgcaa agaacagaag agtctgttat ctccaaagga ttggagctgc
1081tggagaatag tttattgaga atagaagaca atagtctact ttaccagtac ttagaaatca
1141agagttttct tactgtacct cagggcttag tgaaagtaat gacactttgc cccattgaga
1201cactgaggaa aaagagttta gctatgcttc agctgtatat taacaagttg gattcacaag
1261gcaaatatac attatttagg tgcttattga atacaagtaa tcactcaggt gtggaggctt
1321ttattattca aaatatcaaa aatcaaattg acatgtcatt aaagagaaca cgtaacaaca
1381aatggtttac aggaccacag ttgatttccc ttcttgattt ggtacttttt ctcccagagg
1441gtgcagaaac agatttactg caaaactcag ataggattat ggcttcatta aatttattga
1501ggtatttggt tatcaaagat aatgaaaatg acaatcaaac tggattatgg acagaacttg
1561gaaatattga gaataatttc ttaaagccac ttcatatagg acttaatatg tcaaaagcac
1621attatgaagc agaaattaaa aatagccaag aggcccagaa atctaaagat ctttgttcta
1681taactgtaag tggagaagag atccctaata tgcctcctga aatgcagctt aaggtcctgc
1741attcagctct tttcacattt gatttgattg aaagtgttct agctcgagtg gaagaactca
1801ttgaaataaa aacaaagtct acctctgaag aaaatattgg gataaagtgc ccaactttct
1861tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
1921aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

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