Construct: ORF ccsbBroad304_02736

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006371.1_s304c1, BRDN0000407874
Derived from:
ccsbBroadEn_02736
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FAM168A (23201)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_02736
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23201 FAM168A family with sequence simila... NM_015159.3 100% 100%
2 human 23201 FAM168A family with sequence simila... NM_001286050.2 96.3% 96.3% 151_177del
3 human 23201 FAM168A family with sequence simila... XM_017017415.2 82.1% 81.7% 151_152ins126
4 human 23201 FAM168A family with sequence simila... NM_001286051.2 54.8% 54.4% 277_278ins318
5 human 23201 FAM168A family with sequence simila... XM_017017416.2 52.8% 52.4% 151_177del;304_305ins318
6 mouse 319604 Fam168a family with sequence simila... NM_178764.3 94.8% 100% (many diffs)
7 mouse 319604 Fam168a family with sequence simila... XM_006507922.2 94.8% 100% (many diffs)
8 mouse 319604 Fam168a family with sequence simila... XM_006507919.2 91.3% 96.3% (many diffs)
9 mouse 319604 Fam168a family with sequence simila... XM_006507920.2 91.3% 96.3% (many diffs)
10 mouse 319604 Fam168a family with sequence simila... XM_011241829.2 77.4% 81.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
771
ORF length:
705
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa ccctgtttac agccccgtgc agcctggggc tccttatggc aaccctaaga
121acatggccta cacgggttac cccacagcct atccagcagc tgcccctgcc tacaatccca
181gcctgtaccc caccaatagt cccagttatg ctccagcaac tctgctgatg aaacaggcct
241ggccacagaa ctcgtcttcc tgtggcactg aaggcacctt ccacctccca gtggacaccg
301ggaccgagaa ccgaacttac caagcatcct ctgcggcttt cagatatact gcggggacac
361catacaaggt cccaccgacc cagagtaaca ctgctccacc cccctactcc ccatcaccca
421acccctatca gacggccatg tatccaatca gaagtgccta cccccagcag aatctgtatg
481cccagggagc ctactacaca cagccggtgt atgctgccca gcctcatgtc atccaccata
541ccacggtcgt ccagcccaac agcattccct ctgctatcta cccagcacct gttgccgccc
601cgaggaccaa cggtgtggcc atgggcatgg tggcaggcac caccatggca atgtcagcag
661gtaccctgct gactacaccc cagcacacgg cgattggggc acaccctgtc tccatgccaa
721catatagggc ccaaggaacc cctgcgtaca gctacgtgcc cccacactgg tacccaactt
781tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
841agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)