Construct: ORF ccsbBroad304_04604

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010350.1_s304c1, BRDN0000401171
Derived from:
ccsbBroadEn_04604
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
FBXO44 (93611)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_04604
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93611 FBXO44 F-box protein 44 NM_001304790.1 100% 100%
2 human 93611 FBXO44 F-box protein 44 NM_183412.3 100% 100%
3 human 93611 FBXO44 F-box protein 44 NM_183413.2 100% 100%
4 human 93611 FBXO44 F-box protein 44 XM_017002844.2 100% 100%
5 human 93611 FBXO44 F-box protein 44 XM_024450967.1 100% 100%
6 human 93611 FBXO44 F-box protein 44 XM_024450974.1 88.1% 88.1% 1_90del
7 human 93611 FBXO44 F-box protein 44 NM_001330355.1 87.5% 87.5% 363_458del
8 human 93611 FBXO44 F-box protein 44 XM_005263536.4 87.5% 87.5% 363_458del
9 human 93611 FBXO44 F-box protein 44 XM_005263537.1 87.5% 87.5% 363_458del
10 human 93611 FBXO44 F-box protein 44 XM_006711043.3 87.5% 87.5% 363_458del
11 human 93611 FBXO44 F-box protein 44 XM_011542435.1 87.5% 87.5% 363_458del
12 human 93611 FBXO44 F-box protein 44 XM_017002842.2 87.5% 87.5% 363_458del
13 human 93611 FBXO44 F-box protein 44 NM_001014765.1 80.3% 47% 363_487del;765_766ins32
14 human 93611 FBXO44 F-box protein 44 NM_001304791.2 80.3% 47% 363_487del;765_766ins32
15 human 93611 FBXO44 F-box protein 44 NM_033182.7 80.3% 47% 363_487del;765_766ins32
16 human 93611 FBXO44 F-box protein 44 XM_006711045.3 80.3% 47% 363_487del;765_766ins32
17 human 93611 FBXO44 F-box protein 44 XM_017002843.2 80.3% 47% 363_487del;765_766ins32
18 human 93611 FBXO44 F-box protein 44 NR_130909.1 23% (many diffs)
19 mouse 230903 Fbxo44 F-box protein 44 NM_001161852.2 88.5% 87.5% (many diffs)
20 mouse 230903 Fbxo44 F-box protein 44 NM_001161851.2 71.7% 44.7% (many diffs)
21 mouse 230903 Fbxo44 F-box protein 44 NM_173401.5 71.7% 44.7% (many diffs)
22 mouse 230903 Fbxo44 F-box protein 44 XM_017320176.1 71.7% 44.7% (many diffs)
23 mouse 230903 Fbxo44 F-box protein 44 XM_017320177.1 71.7% 44.7% (many diffs)
24 mouse 230903 Fbxo44 F-box protein 44 XM_017320178.1 71.7% 44.7% (many diffs)
25 mouse 230903 Fbxo44 F-box protein 44 XM_017320180.1 57.1% 50% (many diffs)
26 mouse 230903 Fbxo44 F-box protein 44 XM_011250236.2 55.8% 52.3% (many diffs)
27 mouse 230903 Fbxo44 F-box protein 44 XM_017320179.1 45.4% 17.5% (many diffs)
28 mouse 230903 Fbxo44 F-box protein 44 XR_881428.2 42% (many diffs)
29 mouse 230903 Fbxo44 F-box protein 44 NR_104374.1 35.9% (many diffs)
30 mouse 230903 Fbxo44 F-box protein 44 NR_104375.1 35.8% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
738
ORF length:
672
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc tgtggggaac atcaacgagc tgcccgagaa catcctgctg gagctgttca
121cgcacgtgcc cgcccgccag ctgctgctga actgccgcct ggtctgcagc ctctggcggg
181acctcatcga cctcgtgacc ctctggaaac gcaagtgcct gcgagagggc ttcatcactg
241aggactggga ccagcccgtg gccgactgga agatcttcta cttcttacgg agcctgcaca
301ggaacctcct gcacaacccg tgcgctgaag aggggttcga gttctggagc ctggatgtga
361atggaggcga tgagtggaag gtggaggatc tctctcgaga ccagaggaag gaattcccca
421atgaccaggt tcgcagccag gccagattgc gggtccaagt accagctgtg cgttcagctc
481ctgtcgtccg cgcacgcgcc tctggggacc ttccagccag acccggcgac catccagcag
541aagagcgatg ccaagtggag ggaggtctcc cacacattct ccaactaccc gcccggcgtc
601cgctacatct ggtttcagca cggcggcgtg gacactcatt actgggccgg ctggtacggc
661ccgagggtca ccaacagcag catcaccatc gggcccccgc tgccctgaca ccccctgagc
721ccccatctgc tgaaccctgc ccaactttct tgtacaaagt ggttggtaag cctatcccta
781accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
841agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)