Construct: ORF ccsbBroad304_05292

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009930.1_s304c1, BRDN0000407870
Derived from:
ccsbBroadEn_05292
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MSRB3 (253827)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05292
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 253827 MSRB3 methionine sulfoxide reduct... NM_001031679.3 100% 100%
2 human 253827 MSRB3 methionine sulfoxide reduct... NM_001193460.2 100% 100%
3 human 253827 MSRB3 methionine sulfoxide reduct... NM_001193461.1 100% 100%
4 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448918.1 100% 100%
5 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448919.1 100% 100%
6 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448920.1 100% 100%
7 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448921.1 100% 100%
8 human 253827 MSRB3 methionine sulfoxide reduct... NM_198080.4 86.8% 83.4% (many diffs)
9 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448922.1 31.3% 29.2% (many diffs)
10 mouse 320183 Msrb3 methionine sulfoxide reduct... NM_177092.4 85.8% 92% (many diffs)
11 mouse 320183 Msrb3 methionine sulfoxide reduct... XM_006513764.3 63.4% 67.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
621
ORF length:
555
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgtc tgcattcaac ctgctgcatt tggtgacaaa gagccagcca gtagcccttc
121gagcctgtgg gcttccctca gggtcgtgta gggataaaaa gaactgtaag gtggtctttt
181cccagcagga actgaggaag cggctaacac ccctgcagta ccatgtcact caggagaaag
241ggaccgaaag tgcctttgaa ggagaataca cacatcacaa agatcctgga atatataaat
301gtgttgtttg tggaactcca ttgtttaagt cagaaaccaa atttgactcc ggttcaggtt
361ggccttcatt ccacgatgtg atcaattctg aggcaatcac attcacagat gacttttcct
421atgggatgca cagggtggaa acaagctgct ctcagtgtgg tgctcacctt gggcacattt
481ttgatgatgg gcctcgtcca actgggaaaa gatactgcat aaattcggct gccttgtctt
541ttacacctgc ggatagcagt ggcaccgccg agggaggcag tggggtcgcc agcccggccc
601aggcagacaa agcggagctc tacccaactt tcttgtacaa agtggttggt aagcctatcc
661ctaaccctct cctcggtctc gattctacgt agtaatgagc tagcgctaac cggtggcgcg
721ttaagtcgac aatcaacctc tggatta

Download FASTA (ORF) (Full)