Construct: ORF ccsbBroad304_05652

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016263.1_s304c1, BRDN0000461098
Derived from:
ccsbBroadEn_05652
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
VWC2L (402117)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_05652
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 402117 VWC2L von Willebrand factor C dom... NM_001080500.4 100% 100%
2 human 402117 VWC2L von Willebrand factor C dom... NM_001345929.2 62.6% 59% 389_390ins130;417_418ins119
3 human 402117 VWC2L von Willebrand factor C dom... NR_159945.1 13.9% 1_813del;1332_1481del;1630_4788del
4 mouse 320460 Vwc2l von Willebrand factor C dom... NM_177164.3 94.7% 98.6% (many diffs)
5 mouse 320460 Vwc2l von Willebrand factor C dom... XM_006496063.3 94.7% 98.6% (many diffs)
6 mouse 320460 Vwc2l von Willebrand factor C dom... XM_006496064.2 74.7% 77% (many diffs)
7 mouse 320460 Vwc2l von Willebrand factor C dom... NM_001310658.1 58.5% 58.5% (many diffs)
8 mouse 320460 Vwc2l von Willebrand factor C dom... XR_373257.3 27.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
735
ORF length:
666
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggctcttcat attcatgaag cttgcatact tctgttggtc atccctggat
121tggtcacctc tgctgctatc agtcatgaag actatcctgc tgatgaaggt gaccagatct
181ccagtaatga caatctgatc tttgatgact atcgagggaa agggtgtgtc gatgacagcg
241gctttgtata caagttggga gaacgatttt tccctgggca ttccaactgt ccatgtgtct
301gtgctctaga tggacctgtt tgcgaccaac cagaatgccc taaaattcac ccaaagtgta
361ctaaagtgga acacaatgga tgctgtcctg agtgcaaaga agtaaaaaac ttctgtgaat
421atcacgggaa aaattacaaa atcttggagg aatttaagcc ctctccatgt gaatggtgtc
481gctgtgagcc cagcaatgaa gttcactgtg ttgtagcaga ctgcgcagtt cctgagtgtg
541tcaacccagt ctatgaacca gaacaatgtt gtcctgtctg caaaaatggt ccaaactgct
601ttgcaggaac gacgataatt ccagctggca ttgaagtgaa agtggacgaa tgtaacatct
661gtcattgtca caacggggac tggtggaagc ctgctcagtg ttcgaaacgt gaatgccaag
721gcaagcagac tgtgttgcca actttcttgt acaaagtggt tggtaagcct atccctaacc
781ctctcctcgg tctcgattct acgtagtaat gagctagcgc taaccggtgg cgcgttaagt
841cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)