Construct: ORF ccsbBroad304_06338

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011781.1_s304c1, BRDN0000405743
Derived from:
ccsbBroadEn_06338
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GTF2A2 (2958)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06338
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2958 GTF2A2 general transcription facto... NM_001320929.2 99.6% 100% 315C>T
2 human 2958 GTF2A2 general transcription facto... NM_001320930.2 99.6% 100% 315C>T
3 human 2958 GTF2A2 general transcription facto... NM_004492.3 99.6% 100% 315C>T
4 mouse 235459 Gtf2a2 general transcription facto... NM_001039519.2 95.1% 99% (many diffs)
5 mouse 235459 Gtf2a2 general transcription facto... NM_001282083.1 95.1% 99% (many diffs)
6 mouse 235459 Gtf2a2 general transcription facto... XM_006511116.2 95.1% 99% (many diffs)
7 mouse 235459 Gtf2a2 general transcription facto... NM_001282084.1 55.7% 55% (many diffs)
8 mouse 235459 Gtf2a2 general transcription facto... NR_104093.1 30% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
393
ORF length:
327
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc atatcagtta tacagaaata ctactttggg aaacagtctt caggagagcc
121tagatgagct catacagtct caacagatca ccccccaact tgcccttcaa gttctacttc
181agtttgataa ggctataaat gcagcactgg ctcagagggt caggaacaga gtcaatttca
241ggggctctct aaatacgtac agattctgcg ataatgtgtg gacttttgta ctgaatgatg
301ttgaattcag agaggtgaca gaacttatta aagtggataa agtgaaaatt gtagcctgtg
361atggtaaaaa tactggctct aatactacag aatgcccaac tttcttgtac aaagtggttg
421gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
481accggtggcg cgttaagtcg acaatcaacc tctggatta

Download FASTA (ORF) (Full)