Construct: ORF ccsbBroad304_06605

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018410.1_s304c1, BRDN0000399224
Derived from:
ccsbBroadEn_06605
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TRIM37 (4591)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06605
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4591 TRIM37 tripartite motif containing 37 NM_001005207.5 99.9% 99.8% 322A>G;1264T>C
2 human 4591 TRIM37 tripartite motif containing 37 NM_015294.6 99.8% 99.8% 322A>G;1264T>C;2892G>A
3 human 4591 TRIM37 tripartite motif containing 37 XM_005257385.1 99% 98.9% 322A>G;1264T>C;2694_2720del
4 human 4591 TRIM37 tripartite motif containing 37 NM_001353084.2 98.9% 98.9% (many diffs)
5 human 4591 TRIM37 tripartite motif containing 37 XM_017024667.1 98.1% 98.1% 322A>G;806_807ins51;1213T>C
6 human 4591 TRIM37 tripartite motif containing 37 NM_001353086.2 98.1% 98.1% (many diffs)
7 human 4591 TRIM37 tripartite motif containing 37 XM_017024663.2 97.7% 97.6% 322A>G;1264T>C;2893_2958del
8 human 4591 TRIM37 tripartite motif containing 37 XM_011524832.2 97.3% 97.3% 322A>G;1264T>C;2892_2967delinsA
9 human 4591 TRIM37 tripartite motif containing 37 XM_017024664.1 97.2% 97.2% (many diffs)
10 human 4591 TRIM37 tripartite motif containing 37 XM_017024662.1 96.8% 96.7% (many diffs)
11 human 4591 TRIM37 tripartite motif containing 37 XM_011524831.1 96.4% 96.4% (many diffs)
12 human 4591 TRIM37 tripartite motif containing 37 NM_001320987.3 96.3% 96.3% (many diffs)
13 human 4591 TRIM37 tripartite motif containing 37 NM_001320989.3 95.8% 95.8% 322A>G;1264T>C;2691_2692ins117
14 human 4591 TRIM37 tripartite motif containing 37 NM_001320988.3 95.8% 95.8% (many diffs)
15 human 4591 TRIM37 tripartite motif containing 37 NM_001353082.2 95.4% 95.4% (many diffs)
16 human 4591 TRIM37 tripartite motif containing 37 XM_011524833.1 94.7% 94.7% (many diffs)
17 human 4591 TRIM37 tripartite motif containing 37 XM_017024669.2 94.6% 94.6% (many diffs)
18 human 4591 TRIM37 tripartite motif containing 37 XM_017024665.1 93.9% 93.9% (many diffs)
19 human 4591 TRIM37 tripartite motif containing 37 XM_011524836.1 93.4% 93.4% (many diffs)
20 human 4591 TRIM37 tripartite motif containing 37 XM_011524834.1 93% 93% (many diffs)
21 human 4591 TRIM37 tripartite motif containing 37 XM_017024670.2 92.3% 92.3% (many diffs)
22 human 4591 TRIM37 tripartite motif containing 37 NM_001353085.2 83.9% 84% 0_1ins462;802T>C;2430G>A
23 human 4591 TRIM37 tripartite motif containing 37 XM_017024671.2 83.9% 84% 0_1ins462;802T>C;2430G>A
24 human 4591 TRIM37 tripartite motif containing 37 NM_001320990.3 83.2% 83.2% (many diffs)
25 human 4591 TRIM37 tripartite motif containing 37 XM_024450765.1 81.8% 81.9% 0_1ins462;802T>C;2430_2505delinsA
26 human 4591 TRIM37 tripartite motif containing 37 XM_017024672.1 79.9% 79.9% (many diffs)
27 human 4591 TRIM37 tripartite motif containing 37 NM_001353083.2 74.5% 74.5% 0_1ins735;529T>C;2157G>A
28 human 4591 TRIM37 tripartite motif containing 37 XM_017024673.2 71.9% 72% (many diffs)
29 human 4591 TRIM37 tripartite motif containing 37 NR_148347.2 64% (many diffs)
30 human 4591 TRIM37 tripartite motif containing 37 NR_148346.2 63.7% (many diffs)
31 mouse 68729 Trim37 tripartite motif-containing 37 NM_197987.2 88.4% 92.3% (many diffs)
32 mouse 68729 Trim37 tripartite motif-containing 37 NM_001363026.1 87% 86.9% (many diffs)
33 mouse 68729 Trim37 tripartite motif-containing 37 XM_006534072.3 86.4% 90.7% (many diffs)
34 mouse 68729 Trim37 tripartite motif-containing 37 XM_011249212.3 86.4% 90.7% (many diffs)
35 mouse 68729 Trim37 tripartite motif-containing 37 NM_001363027.1 85.1% 89.1% (many diffs)
36 mouse 68729 Trim37 tripartite motif-containing 37 NM_001363028.1 84.6% 88.9% (many diffs)
37 mouse 68729 Trim37 tripartite motif-containing 37 NM_001363025.1 84.3% 88% (many diffs)
38 mouse 68729 Trim37 tripartite motif-containing 37 XM_011249210.2 83% 82.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2958
ORF length:
2892
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga tgaacagagc gtggagagca ttgctgaggt tttccgatgt ttcatttgta
121tggagaaatt gcgggatgca cgcctgtgtc ctcattgctc caaactgtgt tgtttcagct
181gtattaggcg ctggctgaca gagcagagag ctcaatgtcc tcattgccgt gctccactcc
241agctacgaga actagtaaat tgtcgttggg cagaagaagt aacacaacag cttgatactc
301ttcaactctg cagtctcacc aaacatgaag aaaatgaaaa ggacaaatgt gaaaatcacc
361atgaaaaact tagtgtattt tgctgggctt gtaagaagtg tatctgccat cagtgtgcac
421tttggggagg aatgcatggc ggacatacct ttaaaccttt ggcagaaatt tatgagcaac
481acgtcactaa agtgaatgaa gaggtagcca aacttcgtcg gcgtctcatg gaactgatca
541gcttagttca agaagtggaa aggaatgtag aagctgtaag aaatgcaaaa gatgagcgtg
601ttcgggaaat taggaatgca gtggagatga tgattgcacg gttagacaca cagctgaaga
661ataagcttat aacactgatg ggtcagaaga catctctaac ccaagaaaca gagcttttgg
721aatccttact tcaggaggtg gagcaccagt tgcggtcttg tagtaagagt gagttgatat
781ctaagagctc agagatcctt atgatgtttc agcaagttca tcggaagccc atggcatctt
841ttgttaccac tcctgttcca ccagacttta ccagtgaatt agtgccatct tacgattcag
901ctacttttgt tttagagaat ttcagcactt tgcgtcagag agcagatcct gtttacagtc
961cacctcttca agtttcagga ctttgctgga ggttaaaagt ttacccagat ggaaatggag
1021ttgtgcgagg ttactactta tctgtgtttc tggagctctc agctggcttg cctgaaactt
1081ctaaatatga atatcgtgta gagatggttc accagtcctg taatgatcct acaaaaaata
1141tcattcgaga atttgcatct gactttgaag ttggagaatg ctggggctat aatagatttt
1201tccgtttgga cttactcgca aatgaaggat acttgaatcc acaaaatgat acagtgattt
1261taaggtttca ggtacgttca ccaactttct ttcaaaaatc ccgggaccag cattggtaca
1321ttactcagct ggaagctgca cagactagtt atatccaaca aataaacaac cttaaagaga
1381gacttactat tgagctgtct cgaactcaga agtcaagaga tttgtcacca ccagataacc
1441atcttagccc ccaaaatgat gatgctctgg agacacgagc taagaagtct gcatgctctg
1501acatgcttct cgaaggtggt cctactacag cttctgtaag agaggccaaa gaggatgaag
1561aagatgagga gaagattcag aatgaagatt atcatcacga gctttcagat ggagatctgg
1621atctggatct tgtttatgag gatgaagtaa atcagctcga tggcagcagt tcctctgcta
1681gttccacagc aacaagtaat acagaagaaa atgatattga tgaagaaact atgtctggag
1741aaaatgatgt ggaatataac aacatggaat tagaagaggg agaactcatg gaagatgcag
1801ctgctgcagg acccgcaggt agtagccatg gttatgtggg ttccagtagt agaatatcaa
1861gaagaacaca tttatgctcc gctgctacca gtagtttact agacattgat ccattaattt
1921taatacattt gttggacctt aaggaccgga gcagtataga aaatttgtgg ggcttacagc
1981ctcgcccacc tgcttcactt ctgcagccca cagcatcata ttctcgaaaa gataaagacc
2041aaaggaagca acaggcaatg tggcgagtgc cctctgattt aaagatgcta aaaagactca
2101aaactcaaat ggccgaagtt cgatgtatga aaactgatgt aaagaataca ctttcagaaa
2161taaaaagcag cagtgctgct tctggagaca tgcagacaag ccttttttct gctgaccagg
2221cagctctggc tgcatgtgga actgaaaact ctggcagatt gcaggatttg ggaatggaac
2281tcctggcaaa gtcatcagtt gccaattgtt acatacgaaa ctccacaaat aagaagagta
2341attcgcccaa gccagctcga tccagtgtag caggtagtct atcacttcga agagcagtgg
2401accctggaga aaatagtcgt tcaaagggag actgtcagac tctgtctgaa ggctccccag
2461gaagctctca gtctgggagc aggcacagtt ctccccgagc cttgatacat ggcagtatcg
2521gtgatattct gccaaaaact gaagaccggc agtgtaaagc tttggattca gatgctgttg
2581tggttgcagt tttcagtggc ttgcctgcgg ttgagaaaag gaggaaaatg gtcaccttgg
2641gggctaatgc taaaggaggt catctggaag gactgcagat gactgatttg gaaaataatt
2701ctgaaactgg agagttacag cctgtactac ctgaaggagc ttcagctgcc cctgaagaag
2761gaatgagtag cgacagtgac attgaatgtg acactgagaa tgaggagcag gaagagcata
2821ccagtgtggg cgggtttcac gactccttca tggtcatgac acagcccccg gatgaagata
2881cacattccag ttttcctgat ggtgaacaaa taggccctga agatctcagc ttcaatacag
2941atgaaaatag tggaagatac ccaactttct tgtacaaagt ggttggtaag cctatcccta
3001accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
3061agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.