Construct: ORF ccsbBroad304_06862

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013983.1_s304c1, BRDN0000404875
Derived from:
ccsbBroadEn_06862
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RGS3 (5998)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_06862
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5998 RGS3 regulator of G protein sign... NM_130795.4 99.9% 99.8% 1331A>G
2 human 5998 RGS3 regulator of G protein sign... NM_001282923.2 83.8% 83% (many diffs)
3 human 5998 RGS3 regulator of G protein sign... NM_144488.6 76.1% 75.4% (many diffs)
4 human 5998 RGS3 regulator of G protein sign... NM_001276261.1 64.4% 64.4% 1191_1192ins978
5 human 5998 RGS3 regulator of G protein sign... NM_001322215.2 58.1% 56.8% (many diffs)
6 human 5998 RGS3 regulator of G protein sign... NM_001276260.2 56.5% 56.4% 0_1ins1194;137A>G
7 human 5998 RGS3 regulator of G protein sign... NM_001282922.2 56.5% 56.4% 0_1ins1194;137A>G
8 human 5998 RGS3 regulator of G protein sign... NM_001351526.2 56.5% 56.4% 0_1ins1194;137A>G
9 human 5998 RGS3 regulator of G protein sign... NM_001322214.1 45.3% 44.2% (many diffs)
10 human 5998 RGS3 regulator of G protein sign... NM_017790.4 38% 36.3% (many diffs)
11 human 5998 RGS3 regulator of G protein sign... NM_144489.3 29.9% 22.1% (many diffs)
12 human 5998 RGS3 regulator of G protein sign... NM_001276262.2 18.3% 18.3% 0_1ins2247
13 human 5998 RGS3 regulator of G protein sign... NM_134427.2 18.3% 18.3% 0_1ins2247
14 mouse 50780 Rgs3 regulator of G-protein sign... NM_134257.3 79.9% 79.6% (many diffs)
15 mouse 50780 Rgs3 regulator of G-protein sign... XM_006538060.3 70.9% 69% (many diffs)
16 mouse 50780 Rgs3 regulator of G-protein sign... XM_006538058.3 67.8% 66% (many diffs)
17 mouse 50780 Rgs3 regulator of G-protein sign... XM_006538057.3 67.3% 65.6% (many diffs)
18 mouse 50780 Rgs3 regulator of G-protein sign... XM_017320307.1 67.3% 65.6% (many diffs)
19 mouse 50780 Rgs3 regulator of G-protein sign... NM_001081650.2 41.2% 41% (many diffs)
20 mouse 50780 Rgs3 regulator of G-protein sign... XM_006538064.3 34.5% 33% (many diffs)
21 mouse 50780 Rgs3 regulator of G-protein sign... NM_019492.3 34.2% 32.7% (many diffs)
22 mouse 50780 Rgs3 regulator of G-protein sign... XM_011250065.2 31.4% 28.2% (many diffs)
23 mouse 50780 Rgs3 regulator of G-protein sign... XM_006538072.3 15.8% 16.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2817
ORF length:
2751
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa ccgcttcaat gggctctgca aggtgtgctc ggagcgccgc taccgccaga
121tcaccatccc gaggggaaag gacggctttg gcttcaccat ctgctgcgac tctccagttc
181gagtccaggc cgtggattcc gggggtccgg cggaacgggc agggctgcag cagctggaca
241cggtgctgca gctgaatgag aggcctgtgg agcactggaa atgtgtggag ctggcccacg
301agatccggag ctgccccagt gagatcatcc tactcgtgtg gcgcatggtc ccccaggtca
361agccaggacc agatggcggg gtcctgcggc gggcctcctg caagtcgaca catgacctcc
421agtcaccccc caacaaacgg gagaagaact gcacccatgg ggtccaggca cggcctgagc
481agcgccacag ctgccacctg gtatgtgaca gctctgatgg gctgctgctc ggcggctggg
541agcgctacac cgaggtggcc aagcgcgggg gccagcacac cctgcctgca ctgtcccgtg
601ccactgcccc caccgacccc aactacatca tcctggcccc gctgaatcct gggagccagc
661tgctccggcc tgtgtaccag gaggatacca tccccgaaga atcagggagt cccagtaaag
721ggaagtccta cacaggcctg gggaagaagt cccggctgat gaagacagtg cagaccatga
781agggccacgg gaactaccaa aactgcccgg ttgtgaggcc gcatgccacg cactcaagct
841atggcaccta cgtcaccctg gcccccaaag tcctggtgtt ccctgtcttt gttcagcctc
901tagatctctg taatcctgcc cggaccctcc tgctgtcaga ggagctgctg ctgtatgaag
961ggaggaacaa ggctgccgag gtgacactgt ttgcctattc ggacctgctg ctcttcacca
1021aggaggacga gcctggccgc tgcgacgtcc tgaggaaccc cctctacctc cagagtgtga
1081agctgcagga aggttcttca gaagacctga aattctgcgt gctctatcta gcagagaagg
1141cagagtgctt attcactttg gaagcgcact cgcaggagca gaagaagaga gtgtgctggt
1201gcctgtcgga gaacatcgcc aagcagcaac agctggcagc atcacccccg gacagcaaga
1261tgtttgagac ggaggcagat gagaagaggg agatggcctt ggaggaaggg aaggggcctg
1321gtgccgagga ttccccaccc agcaaggagc cctctcctgg ccaggagctt cctccaggac
1381aagaccttcc acccagcaag gactcccctt ctgggcagga acccgctccc agccaagaac
1441cactgtccag caaagactca gctacctctg aaggatcccc tccaggccca gatgctccgc
1501ccagcaagga tgtgccacca tgccaggaac cccctccagc ccaagacctc tcaccctgcc
1561aggacctacc tgctggtcaa gaacccctgc ctcaccagga ccctctactc accaaagacc
1621tccctgccat ccaggaatcc cccacccggg accttccacc ctgtcaagat ctgcctccta
1681gccaggtctc cctgccagcc aaggccctta ctgaggacac catgagctcc ggggacctac
1741tagcagctac tggggaccca cctgcggccc ccaggccagc cttcgtgatc cctgaggtcc
1801ggctggatag cacctacagc cagaaggcag gggcagagca gggctgctcg ggagatgagg
1861aggatgcaga agaggccgag gaggtggagg agggggagga aggggaggag gacgaggatg
1921aggacaccag cgatgacaac tacggagagc gcagtgaggc caagcgcagc agcatgatcg
1981agacgggcca gggggctgag ggtggcctct cactgcgtgt gcagaactcg ctgcggcgcc
2041ggacgcacag cgagggcagc ctgctgcagg agccccgagg gccctgcttt gcctccgaca
2101ccaccttgca ctgctcagac ggtgagggcg ccgcctccac ctggggcatg ccttcgccca
2161gcaccctcaa gaaagagctg ggccgcaatg gtggctccat gcaccacctt tccctcttct
2221tcacaggaca caggaagatg agcggggctg acaccgttgg ggatgatgac gaagcctccc
2281ggaagagaaa gagcaaaaac ctagccaagg acatgaagaa caagctgggg atcttcagac
2341ggcggaatga gtcccctgga gcccctcccg cgggcaaggc agacaaaatg atgaagtcat
2401tcaagcccac ctcagaggaa gccctcaagt ggggcgagtc cttggagaag ctgctggttc
2461acaaatacgg gttagcagtg ttccaagcct tccttcgcac tgagttcagt gaggagaatc
2521tggagttctg gttggcttgt gaggacttca agaaggtcaa gtcacagtcc aagatggcat
2581ccaaggccaa gaagatcttt gctgaataca tcgcgatcca ggcatgcaag gaggtcaacc
2641tggactccta cacgcgggag cacaccaagg acaacctgca gagcgtcacg cggggctgct
2701tcgacctggc acagaagcgc atcttcgggc tcatggaaaa ggactcgtac cctcgctttc
2761tccgttctga cctctacctg gaccttatta accagaagaa gatgagtccc ccgctttacc
2821caactttctt gtacaaagtg gttggtaagc ctatccctaa ccctctcctc ggtctcgatt
2881ctacgtagta atgagctagc gctaaccggt ggcgcgttaa gtcgacaatc aacctctgga
2941tta

Download FASTA (ORF) (Full)