Construct: ORF ccsbBroad304_07497

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013711.1_s304c1, BRDN0000462419
Derived from:
ccsbBroadEn_07497
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
KIAA0319 (9856)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_07497
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9856 KIAA0319 KIAA0319 NM_001168375.2 99.9% 99.8% 424A>C;2618G>A
2 human 9856 KIAA0319 KIAA0319 NM_001350403.2 99.9% 99.8% 424A>C;2618G>A
3 human 9856 KIAA0319 KIAA0319 NM_014809.4 99.9% 99.8% 424A>C;2618G>A
4 human 9856 KIAA0319 KIAA0319 NM_001350404.2 99% 97.7% (many diffs)
5 human 9856 KIAA0319 KIAA0319 NM_001168374.1 98.4% 97.7% (many diffs)
6 human 9856 KIAA0319 KIAA0319 XM_017011541.1 98.4% 97.7% (many diffs)
7 human 9856 KIAA0319 KIAA0319 NM_001350405.2 96.8% 96.7% 424A>C;992_993ins99;2519G>A
8 human 9856 KIAA0319 KIAA0319 XM_017011544.1 96.8% 96.7% 424A>C;992_993ins99;2519G>A
9 human 9856 KIAA0319 KIAA0319 XM_017011542.2 96% 95.4% (many diffs)
10 human 9856 KIAA0319 KIAA0319 NM_001168376.1 95.7% 95.6% 0_1ins135;289A>C;2483G>A
11 human 9856 KIAA0319 KIAA0319 NM_001350406.2 95.7% 95.6% 0_1ins135;289A>C;2483G>A
12 human 9856 KIAA0319 KIAA0319 XM_011515026.3 95.7% 95.6% 0_1ins135;289A>C;2483G>A
13 human 9856 KIAA0319 KIAA0319 NM_001168377.1 94.2% 94.1% 424A>C;2618G>A;2855_2856ins183
14 human 9856 KIAA0319 KIAA0319 NM_001350407.2 91.1% 86.9% (many diffs)
15 human 9856 KIAA0319 KIAA0319 NM_001350408.2 91.1% 86.9% (many diffs)
16 human 9856 KIAA0319 KIAA0319 XM_017011547.1 91.1% 86.9% (many diffs)
17 human 9856 KIAA0319 KIAA0319 XM_017011550.1 91.1% 86.9% (many diffs)
18 human 9856 KIAA0319 KIAA0319 XM_017011546.2 90.9% 88.7% (many diffs)
19 human 9856 KIAA0319 KIAA0319 XM_017011551.1 87.3% 85.3% (many diffs)
20 human 9856 KIAA0319 KIAA0319 NM_001350409.2 85.7% 85.7% 0_1ins456;2162G>A
21 human 9856 KIAA0319 KIAA0319 NM_001350410.2 85.7% 85.7% 0_1ins456;2162G>A
22 human 9856 KIAA0319 KIAA0319 XR_001743779.1 49.1% (many diffs)
23 human 9856 KIAA0319 KIAA0319 XR_001743780.1 47.7% (many diffs)
24 human 9856 KIAA0319 KIAA0319 NM_001252328.1 45% 44.9% 0_1ins1767;851G>A
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3285
ORF length:
3216
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgcccccc acaggtgtgc tctcttcatt gctgctgctg gtgacaattg
121caggttgtgc ccgtaagcag tgcagcgagg ggaggacata ttccaatgca gtcatttcac
181ctaacttgga aaccaccaga atcatgcggg tgtctcacac cttccctgtc gtagactgca
241cggccgcttg ctgtgacctg tccagctgtg acctggcctg gtggttcgag ggccgctgct
301acctggtgag ctgcccccac aaagagaact gtgagcccaa gaagatgggc cccatcaggt
361cttatctcac ttttgtgctc cggcctgttc agaggcctgc acagctgctg gactatgggg
421acatgatgct gaacaggggc tccccctcgg ggatctgggg ggactcacct gaggatatca
481gaaaggactt gccctttcta ggcaaagatt ggggcctaga ggagatgtct gagtactcag
541atgactaccg ggagctggag aaggacctct tgcaacccag tggcaagcag gagcccagag
601ggagtgccga gtacacggac tggggcctac tgccgggcag cgagggggcc ttcaactcct
661ctgttggaga cagtcctgcg gtgccagcgg agacgcagca ggaccctgag ctccattacc
721tgaatgagtc ggcttcaacc cctgccccaa aactccctga gagaagtgtg ttgcttccct
781tgccgactac tccatcttca ggagaggtgt tggagaaaga aaaggcttct cagctccagg
841aacaatccag caacagctct ggaaaagagg ttctaatgcc ttcccatagt cttcctccgg
901caagcctgga gctcagctca gtcaccgtgg agaaaagccc agtgctcaca gtcaccccgg
961ggagtacaga gcacagcatc ccaacacctc ccactagcgc agccccctct gagtccaccc
1021catctgagct acccatatct cctaccactg ctcccaggac agtgaaagaa cttacggtat
1081cggctggaga taacctaatt ataactttac ccgacaatga agttgaactg aaggcctttg
1141ttgcgccagc gccacctgta gaaacaacct acaactatga atggaattta ataagccacc
1201ccacagacta ccaaggtgaa ataaaacaag gacacaagca aactcttaac ctctctcaat
1261tgtccgtcgg actttatgtc ttcaaagtca ctgtttctag tgaaaacgcc tttggagaag
1321gatttgtcaa tgtcactgtt aagcctgcca gaagagtcaa cctgccacct gtagcagttg
1381tttctcccca actgcaagag ctcactttgc ctttgacgtc agccctcatt gatggcagcc
1441aaagtacaga tgatactgaa atagtgagtt atcattggga agaaataaac gggcccttca
1501tagaagagaa gacttcagtt gactctcccg tcttacgctt gtctaacctt gatcctggta
1561actatagttt caggttgact gttacagact cggacggagc cactaactct acaactgcag
1621ccctaatagt gaacaatgct gtggactacc caccagttgc taatgcagga ccaaatcaca
1681ccataacttt gccccaaaac tccatcactt tgaatggaaa ccagagcagt gacgatcacc
1741agattgtcct ctatgagtgg tccctgggtc ctgggagtga gggcaaacat gtggtcatgc
1801agggagtaca gacgccatac cttcatttat ctgcaatgca ggaaggagat tatacatttc
1861agctgaaggt gacagattct tcaaggcaac agtctactgc tgtggtgact gtgattgtcc
1921agcctgaaaa caatagacct ccagtggctg tggccggccc tgataaagag ctgatcttcc
1981cagtggaaag tgctaccctg gatgggagca gcagcagcga tgaccacggc attgtcttct
2041accactggga gcacgtcaga ggccccagtg cagtggagat ggaaaatatt gacaaagcaa
2101tagccactgt gactggtctc caggtgggga cctaccactt ccgtttgaca gtgaaagacc
2161agcagggact gagcagcacg tccaccctca ctgtggctgt gaagaaggaa aataatagtc
2221ctcccagagc ccgggctggt ggcagacatg ttcttgtgct tcccaataat tccattactt
2281tggatggttc aaggtctact gatgaccaaa gaattgtgtc ctatctgtgg atccgggatg
2341gccagagtcc agcagctgga gatgtcatcg atggctctga ccacagtgtg gctctgcagc
2401ttacgaatct ggtggagggg gtgtacactt tccacttgcg agtcaccgac agtcaggggg
2461cctcggacac agacactgcc actgtggaag tgcagccaga ccctaggaag agtggcctgg
2521tggagctgac cctgcaggtt ggtgttgggc agctgacaga gcagcggaag gacacccttg
2581tgaggcagct ggctgtgctg ctgaacgtgc tggactcgga cattaaggtc cagaagattc
2641gggcccactc ggatctcagc accgtgattg tgttttatgt acagaacagg ccgcctttca
2701aggttctcaa agctgctgaa gtggcccgaa atctgcacat gcggctctca aaggagaagg
2761ctgacttctt gcttttcaag gtcttgaggg ttgatacagc aggttgcctt ctgaagtgtt
2821ctggccatgg tcactgcgac cccctcacaa agcgctgcat ttgctctcac ttatggatgg
2881agaaccttat acagcgttat atctgggatg gagagagcaa ctgtgagtgg agtatattct
2941atgtgacagt gttggctttt actcttattg tgctaacagg aggtttcact tggctttgca
3001tctgctgctg caaaagacaa aaaaggacta aaatcaggaa aaaaacaaag tacaccatcc
3061tggataacat ggatgaacag gaaagaatgg aactgaggcc caaatatggt atcaagcacc
3121gaagcacaga gcacaactcc agcctgatgg tatccgagtc tgagtttgac agtgaccagg
3181acacaatctt cagccgagaa aagatggaga gagggaatcc aaaggtttcc atgaatggtt
3241ccatcagaaa tggagcttcc ttcagttatt gctcaaagga cagattgcca actttcttgt
3301acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
3361gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

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