Construct: ORF ccsbBroad304_08729

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016646.1_s304c1, BRDN0000408003
Derived from:
ccsbBroadEn_08729
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MYORG (57462)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08729
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57462 MYORG myogenesis regulating glyco... NM_020702.5 99.9% 99.7% 11A>T;159C>G
2 human 57462 MYORG myogenesis regulating glyco... XM_011517966.3 99.9% 99.7% 11A>T;159C>G
3 human 57462 MYORG myogenesis regulating glyco... XM_017014930.2 99.9% 99.7% 11A>T;159C>G
4 mouse 329828 AI464131 expressed sequence AI464131 NM_001085515.2 83.8% 91.6% (many diffs)
5 mouse 329828 AI464131 expressed sequence AI464131 XM_006538010.2 83.8% 91.6% (many diffs)
6 mouse 329828 AI464131 expressed sequence AI464131 XR_881067.2 65.3% (many diffs)
7 mouse 329828 AI464131 expressed sequence AI464131 XR_881068.2 37.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2208
ORF length:
2142
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct ccagatccct caggagaaga gccaggccta cccccgccgc cgccggcctg
121gctgctacgc ataccgtcag aaccccgagg ccatcgcagc cgcagctatg tacaccttcc
181tgcccgacaa cttctcacct gccaagccca agccttccaa agagctgaag ccgctgctgg
241gctccgcggt tctggggctg ctgcttgtgc tggccgcggt ggtggcctgg tgctactaca
301gcgtctccct acgcaaggcg gagcgacttc gcgcggagct gctggacctg aaagctggcg
361gcttctccat ccgcaatcag aagggagagc aggtcttccg cctggccttc cgctccggcg
421cgctggacct tgactcctgc agccgcgatg gcgccctgct gggctgctcg ctcacggccg
481acgggctgcc gctgcacttc ttcatccaga ctgtgcggcc caaggacacg gtcatgtgct
541accgcgtgcg ctgggaggag gcagcgccgg gccgggccgt ggagcacgcc atgttcttgg
601gcgacgcggc ggcccactgg tatggtggcg ccgagatgag gacgcaacac tggcccatcc
661gcctggatgg ccagcaggag ccccagccgt tcgtcaccag cgatgtctac tcctccgacg
721ccgcgtttgg gggcatcctc gagcgctact ggctatcttc gcgcgcggcc gccatcaaag
781tcaatgactc agtgcccttc cacctgggct ggaacagcac ggagcgctcg ctgcggcttc
841aggcgcgcta ccacgacacg ccctacaagc cacccgccgg ccgcgccgca gcgccagagc
901tgagctaccg agtgtgcgtg ggctcagacg tcacctccat ccacaagtac atggtgcgtc
961gctacttcaa caagccgtca agggtgccag cacccgaggc cttccgagac cccatttggt
1021ccacatgggc gctgtacggg cgcgccgtgg accaggacaa ggtgctgcgt tttgcccaac
1081agatccgcct gcaccacttc aacagcagcc acctggaaat cgacgacatg tacacacctg
1141cttatggcga cttcgacttc gatgaggtca aattccccaa cgccagcgac atgttccgcc
1201gcctgcgcga cgccggcttc cgcgtcacgc tctgggtgca cccttttgtc aactacaact
1261cgtcgcgctt cggcgagggc gtggagcgcg agctgttcgt gcgcgaaccc acgggccggt
1321tacctgcgct ggtgcgctgg tggaacggca tcggcgcggt gctagacttc acgcacccaa
1381aggcccgcga ctggttccag ggacacctgc ggcggctgcg ctctcgctac tccgtggctt
1441ccttcaagtt cgacgcgggc gaggtcagct acctgccgcg ggacttcagc acctaccggc
1501cgctgccgga ccccagcgtc tggagccggc gctacactga gatggcgctg cccttcttct
1561cgctggcgga ggtgcgcgta ggctaccagt cacagaacat ctcctgcttc ttccgcctgg
1621tggatcgcga ctctgtgtgg ggctacgacc tggggttgcg ctcactcatc cccgcggtgc
1681tcaccgtcag catgctgggc tacccattca tcctacccga tatggtgggc ggcaacgccg
1741tgccccagcg gacagccggc ggcgatgtgc ccgagcgcga gctctacatt cgctggctgg
1801aagtggccgc ctttatgccg gccatgcagt tctctatccc gccctggcgc tacgacgcgg
1861aagtggtggc catcgcgcag aagttcgccg ccctgcgggc ctcgcttgtg gcaccgctgt
1921tgcttgagct ggcgggcgag gtcaccgaca cgggtgaccc tatcgtgcgc cccctttggt
1981ggattgcgcc cggcgacgag acagctcacc gtatcgactc gcagttcctt attggggaca
2041cgctgcttgt ggccccggtg ctggagccag gcaagcagga gcgcgacgtc tatttgcccg
2101ccggcaagtg gcgcagctac aagggtgagc ttttcgacaa gacgccggtg ctgctcaccg
2161attacccggt cgacctggat gagatcgcct actttacctg ggcgtcctgc ccaactttct
2221tgtacaaagt ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt
2281aatgagctag cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

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