Construct: ORF ccsbBroad304_08771

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007467.1_s304c1, BRDN0000410356
Derived from:
ccsbBroadEn_08771
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CYP4F11 (57834)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08771
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 57834 CYP4F11 cytochrome P450 family 4 su... NM_001128932.1 99.7% 99.6% (many diffs)
2 human 57834 CYP4F11 cytochrome P450 family 4 su... NM_021187.3 99.7% 99.6% (many diffs)
3 human 8529 CYP4F2 cytochrome P450 family 4 su... NM_001082.5 88.7% 86.2% (many diffs)
4 human 4051 CYP4F3 cytochrome P450 family 4 su... NM_001199208.2 88.5% 85.8% (many diffs)
5 human 4051 CYP4F3 cytochrome P450 family 4 su... NM_001199209.2 88.5% 85.8% (many diffs)
6 human 4051 CYP4F3 cytochrome P450 family 4 su... NM_001369696.1 88.5% 85.8% (many diffs)
7 human 66002 CYP4F12 cytochrome P450 family 4 su... NM_023944.4 87% 83% (many diffs)
8 human 4051 CYP4F3 cytochrome P450 family 4 su... NM_000896.3 85% 82.2% (many diffs)
9 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_017027172.1 68.5% 57.9% (many diffs)
10 human 11283 CYP4F8 cytochrome P450 family 4 su... XM_024451341.1 67.6% 62.7% (many diffs)
11 human 4051 CYP4F3 cytochrome P450 family 4 su... XM_017026815.1 65.9% 62% (many diffs)
12 human 66002 CYP4F12 cytochrome P450 family 4 su... NR_117085.2 64.9% (many diffs)
13 human 4051 CYP4F3 cytochrome P450 family 4 su... XM_005259911.5 64.2% 63.7% (many diffs)
14 human 4051 CYP4F3 cytochrome P450 family 4 su... XM_011528014.3 64.2% 63.7% (many diffs)
15 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_006722850.3 63% 61.4% (many diffs)
16 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_011528202.3 63% 61.4% (many diffs)
17 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_011528208.2 63% 61.4% (many diffs)
18 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_011528203.2 59% 57.4% (many diffs)
19 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_011528204.2 59% 57.4% (many diffs)
20 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_011528205.2 59% 57.4% (many diffs)
21 human 66002 CYP4F12 cytochrome P450 family 4 su... XM_011528207.2 56.2% 54.9% (many diffs)
22 human 4051 CYP4F3 cytochrome P450 family 4 su... XM_024451515.1 52.6% 49.8% (many diffs)
23 human 388514 CYP4F24P cytochrome P450 family 4 su... NR_033864.1 38.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1638
ORF length:
1572
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcc gcagctgagc ctgtcctggc tgggcctcgg gcccgtggca gcatccccgt
121ggctgcttct gctgctggtt gggggctcct ggctcctggc ccgcgtcctg gcctggacct
181acaccttcta tgacaactgc cgccgcctcc agtgttttcc tcaacccccg aaacagaact
241ggttttgggg acaccagggc ctggtcactc ccacggaaga gggcatgaag acattgaccc
301agctggtgac cacatatccc cagggcttta agttgtggct gggtcctacc ttccccctcc
361tcattttatg ccaccctgac atcatccggc ctatcaccag tgcctcagct gctgtcgcac
421ccaaggatat gattttctat ggcttcctga agccctggct gggggatggg ctcctgctga
481gtggtggtga caagtggagc cgccaccgtc ggatgttgac gcctgccttc catttcaaca
541tcttgaagcc ttatatgaag attttcaaca agagtgtgaa catcatgcac gacaagtggc
601agcgcctggc ctcagagggc agcgccagac tggacatgtt tgaacacatc agcctcatga
661ccttggacag tctgcagaaa tgtgtcttca gctttgaaag caattgtcag gagaagccca
721gtgaatatat tgccgccatc ttggagctca gtgcctttgt agaaaagaga aaccagcaga
781ttctcttgca cacggacttc ctgtattatc tcactcctga tgggcagcgc ttccgcaggg
841cctgccacct ggtgcacgac ttcacagatg ccgtcatcca ggagcggcgc cgcaccctcc
901ccactcaggg tattgatgat ttcctcaaga acaaggcaaa gtccaagact ttagacttca
961ttgatgtgct tctgctgagc aaggatgaag atgggaagga attgtctgat gaggacataa
1021gagcagaagc tgacaccttc atgtttgagg gccatgacac tacagccagt ggtctctcct
1081gggtcctata ccaccttgca aagcacccag aataccagga acagtgccgg caagaagtgc
1141aagagcttct gaaggaccgt gaacctatag agattgaatg ggacgacctg gcccagctgc
1201ccttcctgac catgtgcatt aaggagagcc tgcggttgca tcccccagtc ccggtcatct
1261cccgatgttg cacgcaggac tttgtgctcc cagacggccg cgtcatcccc aaaggcattg
1321tctgcctcat caatattatc gggatccatt acaacccaac tgtgtggcca gaccctgagg
1381tctacgaccc cttccgtttc aaccaagaga acatcaagga gaggtcacct ctggctttta
1441ttcccttctc ggcagggccc agaaactgca tcgggcaggc gttcgccatg gctgagatga
1501aggtggtcct ggcgctcacg ctgctgcact tccgcatcct gccgacccac actgaacccc
1561gcaggaaacc cgagctgata ttgcgcgcag agggtggact ttggctgcgg gtggagcccc
1621tgggtgcgaa ctcacagtgc ccaactttct tgtacaaagt ggttggtaag cctatcccta
1681accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1741agtcgacaat caacctctgg atta

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