Construct: ORF ccsbBroad304_08821

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016665.1_s304c1, BRDN0000462306
Derived from:
ccsbBroadEn_08821
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CLSPN (63967)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_08821
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 63967 CLSPN claspin NM_001190481.2 99.8% 99.6% (many diffs)
2 human 63967 CLSPN claspin NM_022111.4 95% 94.9% (many diffs)
3 human 63967 CLSPN claspin XM_011541938.2 94.7% 94.6% (many diffs)
4 human 63967 CLSPN claspin XM_011541940.3 93.1% 92.3% (many diffs)
5 human 63967 CLSPN claspin NM_001330490.2 93% 92.2% (many diffs)
6 human 63967 CLSPN claspin XM_011541941.3 91% 90.8% (many diffs)
7 human 63967 CLSPN claspin XR_001737361.2 58.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3894
ORF length:
3825
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gacaggcgag gtgggttctg aggttcacct agaaatcaat gacccaaacg
121tcatttcaca agaggaagca gatagtcctt cagatagtgg acagggcggc tatgaaacaa
181ttggaccctt gagtgaagga gattcagatg aagagatatt tgtaagtaag aagttgaaaa
241acaggaaggt tctacaagac agtgattccg aaacagagga cacaaatgcc tctccagaga
301aaactaccta tgacagtgcc gaggaggaaa ataaagagaa tttatatgct gggaaaaata
361caaaaatcaa aaggatttac aaaactgtgg cagacagtga tgaaagttac atggaaaagt
421ctttgtatca ggaaaatctt gaagcgcaag tgaaaccttg cttagagctg agtcttcagt
481ctggaaactc tacagacttt accactgaca gaaagagttc caaaaagcac atacatgata
541aagaaggaac tgcaggaaaa gcaaaagtaa aatcaaaaag aagacttgag aaagaggaga
601gaaaaatgga aaaaattaga cagctaaaaa agaaggaaac aaaaaaccag gaagatgatg
661tagaacagcc atttaatgac agtggctgtc ttcttgtgga taaagacctt tttgaaactg
721ggttggagga tgaaaataac tctccattgg aagatgaaga gtcattagaa tcaataagag
781cagctgtaaa aaacaaagta aaaaagcaca agaaaaaaga accatctttg gagagtgggg
841tccattcatt tgaggaagga agtgagttat caaaaggaac cacgaggaag gaaagaaagg
901cagccagatt aagtaaagaa gcattaaaac aactgcatag tgagactcag cgccttattc
961gagagtctgc actgaacctt ccatatcata tgcctgagaa taaaaccatt catgatttct
1021tcaaacgtaa accccggccc acttgccacg gaaatgccat ggcactattg aagtcatcta
1081aatatcagtc aagccatcac aaagaaatca tagacactgc aaatactact gaaatgaaca
1141gtgatcacca tagtaaaggt tctgagcaga caacaggtgc agaaaatgaa gtggaaacta
1201atgcactccc tgtagtttca aaggaaaccc agatcattac tggatcagat gagtcttgca
1261ggaaggattt ggtaaaaaat gaagagctag aaattcagga gaaacagaag cagagtgaca
1321ttagaccttc acctggggac agctcagtgt tgcaacagga atccaacttc ctcgggaaca
1381atcacagtga ggaatgtcag gttgaagggc ttgtagcatt tgaacctcat gccctggagg
1441gtgaaggccc ccaaaatcca gaagaaacag atgagaaagt ggaagagcct gagcagcaaa
1501ataaatcatc agcagttggg ccacctgaaa aagtgagacg gtttactctg gatagactta
1561agcaactggg agtagatgtt tccattaaac cacggctagg tgctgatgaa gattcctttg
1621tgatacttga acctgaaacc aacagaggtg aaaagcttca ggtgttaaaa gctaaactgc
1681aagaagcaat gaaactccga aggtttgagg agcgccagaa gcgccaagca ctgtttaaat
1741tagataatga agatgggttt gaggaagagg aggaggaaga ggaagaaatg acagatgagt
1801ctgaggaaga tggagaagag aaggtagaga aagaagagaa agaggaagaa ctagaggaag
1861aggaggagaa agaagaggag gaggaagaag aaggaaatca ggagactgca gaattccttc
1921ttagtagtga agaaatagaa acaaaagatg aaaaagaaat ggataaagaa aataatgatg
1981gcagtagtga aattggcaag gcagttggct tcctctctgt tcccaagtct ctctcatcag
2041attctacttt acttctgttt aaggacagct cttccaagat gggttacttt cctactgaag
2101aaaaatcaga aacagatgaa aactcaggca agcagcctag caaactggat gaggatgatt
2161catgttcatt gctaacaaag gagagcagcc acaatagcag ctttgagctg attggctcca
2221cgattccatc ctatcagcct tgcaacagac aaacaggccg tgggaccagt tttttcccta
2281cagcaggagg attcagatct ccttcccctg ggctatttcg agccagtttg gtcagctcag
2341cttctaagag ttcagggaaa ctgtctgagc cttcacttcc catagaggat tcccaggatc
2401tgtataacgc ctccccagag cctaagacac ttttcctagg agcaggagac ttccagttct
2461gtttagaaga tgacactcag agccaactgt tggatgcaga tgggttctta aatgttagaa
2521accacaggaa tcagtaccaa gctttgaagc ctcgattgcc attggccagt atggatgaga
2581atgccatgga tgccaacatg gatgagctgt tggatttgtg tactggaaag ttcacatctc
2641aggctgaaaa acatctaccc aggaagggtg acgagaaaga gaacatggag gaacttctga
2701acctttgttc aggaaaattc acttctcagg atgcctccac tccagcctca tcagagttaa
2761ataaacagga gaaggagagc agcatgggtg atccaatgga agaagcactt gctctttgct
2821caggctcttt tcccacagac aaggaagagg aagacgagga ggaggaattt ggagactttc
2881ggcttgtttc aaatgataat gagtttgata gtgatgagga tgaacacagt gactctggta
2941atgatctggc actggaagac catgaagatg atgatgaaga agaactcctg aagcgatctg
3001agaagttgaa aaggcaaatg aggttgagga aatacctgga ggatgaggca gaggtgtcag
3061gaagtgatgt gggaagcgaa gatgagtatg atggggaaga aattgatgaa tatgaagagg
3121acgtaattga tgaagtactt ccttctgatg aggaactgca gagtcaaatc aagaaaatac
3181acatgaaaac tatgttggat gatgataagc gacagctacg tttataccaa gagaggtacc
3241ttgctgatgg ggatctacac agcgatggtc ctgggcgaat gaggaagttt cgatggaaaa
3301acatagatga tgcttcccag atggacttgt tccacagaga ctctgatgat gatcagactg
3361aagaacagct tgatgagtca gaagccaggt ggaggaagga gcgaattgaa cgagagcagt
3421ggcttcggga catggcacag caggggaaaa ttacagctga agaagaagaa gaaattgggg
3481aggacagtca gtttatgata ctggccaaga aagttacagc caaagcactg cagaagaatg
3541ccagtcgccc tatggttatt caggaatcaa agtctttgct cagaaatcct tttgaagcca
3601tcagaccagg aagtgctcaa caggtgaaga caggctcact gctaaaccag cccaaagctg
3661tgcttcagaa actggctgct ctctctgacc ataaccccag tgctcctcga aattcgagaa
3721actttgtctt tcatacactt tctcctgtca aggctgaggc ggcaaaggaa tcgtctaagt
3781ctcaggtaaa gaaaaggggt ccatctttca tgacttctcc ttcacctaag cacctcaaaa
3841cagatgatag cacttcagga ttgacgcgaa gcatcttcaa atatttggag agcttgccaa
3901ctttcttgta caaagtggtt ggtaagccta tccctaaccc tctcctcggt ctcgattcta
3961cgtagtaatg agctagcgct aaccggtggc gcgttaagtc gacaatcaac ctctggatta

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