Construct: ORF ccsbBroad304_10929

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009352.1_s304c1, BRDN0000461791
Derived from:
ccsbBroadEn_10929
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
JAK2 (3717)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_10929
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3717 JAK2 Janus kinase 2 NM_001322194.1 99.7% 99.7% 94_102delATGAAGCAA;2490G>A
2 human 3717 JAK2 Janus kinase 2 NM_001322195.1 99.7% 99.7% 94_102delATGAAGCAA;2490G>A
3 human 3717 JAK2 Janus kinase 2 NM_001322196.1 99.7% 99.7% 94_102delATGAAGCAA;2490G>A
4 human 3717 JAK2 Janus kinase 2 NM_004972.3 99.7% 99.7% 94_102delATGAAGCAA;2490G>A
5 human 3717 JAK2 Janus kinase 2 NM_001322204.1 87% 87% 0_1ins438;2043G>A
6 human 3717 JAK2 Janus kinase 2 NM_001322198.1 64.3% 64.3% 0_1ins1206;1275G>A
7 human 3717 JAK2 Janus kinase 2 NM_001322199.1 64.3% 64.3% 0_1ins1206;1275G>A
8 mouse 16452 Jak2 Janus kinase 2 NM_001048177.2 88.4% 93.5% (many diffs)
9 mouse 16452 Jak2 Janus kinase 2 NM_008413.3 88.4% 93.5% (many diffs)
10 mouse 16452 Jak2 Janus kinase 2 XM_011247155.2 88.4% 93.5% (many diffs)
11 mouse 16452 Jak2 Janus kinase 2 XM_006526713.3 84.9% 89.6% (many diffs)
12 mouse 16452 Jak2 Janus kinase 2 XM_006526714.3 73.7% 78.2% (many diffs)
13 mouse 16452 Jak2 Janus kinase 2 XM_017318068.1 57.2% 61.3% (many diffs)
14 mouse 16452 Jak2 Janus kinase 2 XM_006526715.3 46.3% 47.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3453
ORF length:
3387
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggg aatggcctgc cttacgatga cagaaatgga gggaacatcc acctcttcta
121tatatcagaa tggtgatatt tctggaaatg ccaattctat agatccagtt cttcaggtgt
181atctttacca ttcccttggg aaatctgagg cagattatct gacctttcca tctggggagt
241atgttgcaga agaaatctgt attgctgctt ctaaagcttg tggtatcaca cctgtgtatc
301ataatatgtt tgctttaatg agtgaaacag aaaggatctg gtatccaccc aaccatgtct
361tccatataga tgagtcaacc aggcataatg tactctacag aataagattt tactttcctc
421gttggtattg cagtggcagc aacagagcct atcggcatgg aatatctcga ggtgctgaag
481ctcctcttct tgatgacttt gtcatgtctt acctctttgc tcagtggcgg catgattttg
541tgcacggatg gataaaagta cctgtgactc atgaaacaca ggaagaatgt cttgggatgg
601cagtgttaga tatgatgaga atagccaaag aaaacgatca aaccccactg gccatctata
661actctatcag ctacaagaca ttcttaccaa aatgtattcg agcaaagatc caagactatc
721atattttgac aaggaagcga ataaggtaca gatttcgcag atttattcag caattcagcc
781aatgcaaagc cactgccaga aacttgaaac ttaagtatct tataaatctg gaaactctgc
841agtctgcctt ctacacagag aaatttgaag taaaagaacc tggaagtggt ccttcaggtg
901aggagatttt tgcaaccatt ataataactg gaaacggtgg aattcagtgg tcaagaggga
961aacataaaga aagtgagaca ctgacagaac aggatttaca gttatattgc gattttccta
1021atattattga tgtcagtatt aagcaagcaa accaagaggg ttcaaatgaa agccgagttg
1081taactatcca taagcaagat ggtaaaaatc tggaaattga acttagctca ttaagggaag
1141ctttgtcttt cgtgtcatta attgatggat attatagatt aactgcagat gcacatcatt
1201acctctgtaa agaagtagca cctccagccg tgcttgaaaa tatacaaagc aactgtcatg
1261gcccaatttc gatggatttt gccattagta aactgaagaa agcaggtaat cagactggac
1321tgtatgtact tcgatgcagt cctaaggact ttaataaata ttttttgact tttgctgtcg
1381agcgagaaaa tgtcattgaa tataaacact gtttgattac aaaaaatgag aatgaagagt
1441acaacctcag tgggacaaag aagaacttca gcagtcttaa agatcttttg aattgttacc
1501agatggaaac tgttcgctca gacaatataa ttttccagtt tactaaatgc tgtcccccaa
1561agccaaaaga taaatcaaac cttctagtct tcagaacgaa tggtgtttct gatgtaccaa
1621cctcaccaac attacagagg cctactcata tgaaccaaat ggtgtttcac aaaatcagaa
1681atgaagattt gatatttaat gaaagccttg gccaaggcac ttttacaaag atttttaaag
1741gcgtacgaag agaagtagga gactacggtc aactgcatga aacagaagtt cttttaaaag
1801ttctggataa agcacacaga aactattcag agtctttctt tgaagcagca agtatgatga
1861gcaagctttc tcacaagcat ttggttttaa attatggagt atgtgtctgt ggagacgaga
1921atattctggt tcaggagttt gtaaaatttg gatcactaga tacatatctg aaaaagaata
1981aaaattgtat aaatatatta tggaaacttg aagttgctaa acagttggca tgggccatgc
2041attttctaga agaaaacacc cttattcatg ggaatgtatg tgccaaaaat attctgctta
2101tcagagaaga agacaggaag acaggaaatc ctcctttcat caaacttagt gatcctggca
2161ttagtattac agttttgcca aaggacattc ttcaggagag aataccatgg gtaccacctg
2221aatgcattga aaatcctaaa aatttaaatt tggcaacaga caaatggagt tttggtacca
2281ctttgtggga aatctgcagt ggaggagata aacctctaag tgctctggat tctcaaagaa
2341agctacaatt ttatgaagat aggcatcagc ttcctgcacc aaagtgggca gaattagcaa
2401accttataaa taattgtatg gattatgaac cagatttcag gccttctttc agagccatca
2461tacgagatct taacagtttg tttactccag attatgaact attaacagaa aatgacatgt
2521taccaaatat gaggataggt gccctagggt tttctggtgc ctttgaagac cgggatccta
2581cacagtttga agagagacat ttgaaatttc tacagcaact tggcaagggt aattttggga
2641gtgtggagat gtgccggtat gaccctctac aggacaacac tggggaggtg gtcgctgtaa
2701aaaagcttca gcatagtact gaagagcacc taagagactt tgaaagggaa attgaaatcc
2761tgaaatccct acagcatgac aacattgtaa agtacaaggg agtgtgctac agtgctggtc
2821ggcgtaatct aaaattaatt atggaatatt taccatatgg aagtttacga gactatcttc
2881aaaaacataa agaacggata gatcacataa aacttctgca gtacacatct cagatatgca
2941agggtatgga gtatcttggt acaaaaaggt atatccacag ggatctggca acgagaaata
3001tattggtgga gaacgagaac agagttaaaa ttggagattt tgggttaacc aaagtcttgc
3061cacaagacaa agaatactat aaagtaaaag aacctggtga aagtcccata ttctggtatg
3121ctccagaatc actgacagag agcaagtttt ctgtggcctc agatgtttgg agctttggag
3181tggttctgta tgaacttttc acatacattg agaagagtaa aagtccacca gcggaattta
3241tgcgtatgat tggcaatgac aaacaaggac agatgatcgt gttccatttg atagaacttt
3301tgaagaataa tggaagatta ccaagaccag atggatgccc agatgagatc tatatgatca
3361tgacagaatg ctggaacaat aatgtaaatc aacgcccctc ctttagggat ctagctcttc
3421gagtggatca aataagggat aacatggctg gatgcccaac tttcttgtac aaagtggttg
3481gtaagcctat ccctaaccct ctcctcggtc tcgattctac gtagtaatga gctagcgcta
3541accggtggcg cgttaagtcg acaatcaacc tctggatta

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