Construct: ORF ccsbBroad304_11345

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017085.1_s304c1, BRDN0000409064
Derived from:
ccsbBroadEn_11345
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARHGEF2 (9181)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11345
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... NM_004723.3 99.8% 99.8% 497_498insAGC
2 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... NM_001350110.1 98.9% 98.9% 2804_2833del
3 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... NM_001350111.1 98.9% 98.9% 2804_2833del
4 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_005245594.3 98.9% 98.9% 2804_2833del
5 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_017002797.2 98.8% 98.8% 497_498insAGC;2801_2830del
6 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_006711622.4 97.9% 97.9% 1_30del;2834_2863del
7 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... NM_001350112.1 97.8% 97.8% 1_30del;527_528insAGC;2831_2860del
8 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_005245590.4 97.7% 97.7% 1_36del;2840_2869del
9 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_005245591.4 97.7% 97.7% 1_36del;2840_2869del
10 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... NM_001162383.2 97.2% 97.2% 1_81del
11 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... NM_001162384.1 97.1% 97.1% 1_81del;578_579insAGC
12 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_005245589.5 97% 97% 1_57del;2861_2890del
13 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_017002795.2 96.9% 96.9% 1_57del;554_555insAGC;2858_2887del
14 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_005245587.3 96.2% 96.2% 1_81del;2885_2914del
15 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_005245588.3 96.1% 96.1% 1_81del;578_579insAGC;2882_2911del
16 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_006711623.4 93.9% 91.8% 0_1ins79;48_49ins68;2657_2686del
17 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_006711624.4 93.9% 91.8% 0_1ins79;48_49ins68;2657_2686del
18 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_006711625.4 93.9% 91.8% 0_1ins79;48_49ins68;2657_2686del
19 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_006711626.3 93.9% 91.8% 0_1ins79;48_49ins68;2657_2686del
20 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_017002798.2 93.9% 91.8% 0_1ins79;48_49ins68;2657_2686del
21 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_024450815.1 93.9% 91.8% 0_1ins79;48_49ins68;2657_2686del
22 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_024450823.1 93.8% 91.7% (many diffs)
23 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_011510137.3 84.9% 84.9% 1_510del
24 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_017002794.2 84.8% 84.8% 1_510del;1007_1008insAGC
25 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_011510139.3 84.1% 84.1% 1_510del;3314_3343del
26 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_011510136.3 84.1% 84.1% 1_510del;1007_1008insAGC;3311_3340del
27 human 9181 ARHGEF2 Rho/Rac guanine nucleotide ... XM_011510143.3 83.2% 83.2% 0_1ins456;2348_2377del
28 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... NM_001198912.1 84.6% 88.5% (many diffs)
29 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501067.3 84.6% 88.5% (many diffs)
30 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... NM_001198913.1 84.4% 88.3% (many diffs)
31 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501066.1 83.6% 87.4% (many diffs)
32 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... NM_001198911.1 83.4% 87.2% (many diffs)
33 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501064.3 83% 86.8% (many diffs)
34 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501065.3 82.8% 86.6% (many diffs)
35 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... NM_008487.3 82.3% 86.1% (many diffs)
36 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501061.2 78.7% 82.3% (many diffs)
37 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501060.3 72.6% 75.8% (many diffs)
38 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501058.2 68.5% 71.6% (many diffs)
39 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_006501059.2 68.3% 71.4% (many diffs)
40 mouse 16800 Arhgef2 rho/rac guanine nucleotide ... XM_011240027.2 62.8% 65.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2943
ORF length:
2877
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaacg
61ttggcatgaa ggaagccaag gatgcccgct ataccaatgg gcacctcttc accaccattt
121cagtttcagg catgaccatg tgctatgcct gtaacaagag catcacagcc aaggaagccc
181tcatctgccc aacctgcaat gtgactatcc acaaccgctg taaagacacc ctcgccaact
241gtaccaaggt caagcagaag caacagaaag cggccctgct gaagaacaac accgccttgc
301agtccgtttc tcttcgaagt aagacaacca tccgggagcg gccaagctcg gccatctacc
361cctccgacag cttccggcag tccctcctgg gctcccgccg tggccgctcc tccttgtctt
421tagccaagag tgtttctacc accaacattg ctggacattt caatgatgag tctcccctgg
481ggctgcgccg gatcctctca cagtccacag actccctcaa catgcggaac cgaaccctat
541ccgtggaatc cctcattgac gaagcagagg taatctacag tgagctgatg agtgactttg
601agatggatga gaaggacttt gcagctgact cttggagtct tgctgtggac agcagcttcc
661tgcagcagca taaaaaggag gtgatgaagc agcaagatgt catctatgag ctaatccaga
721cagagctgca ccatgtgagg acactgaaga tcatgacccg cctcttccgc acggggatgc
781tggaagagct acacttggag ccaggagtgg tccagggcct gttcccctgc gtggacgagc
841tcagtgacat ccatacacgc ttcctcagcc agctattaga acgccgacgc caggccctgt
901gccctggcag cacccggaac tttgtcatcc atcgcttggg tgatctgctc atcagccagt
961tctcaggtcc tagtgcggag cagatgtgta agacctactc ggagttctgc agccgccaca
1021gcaaggcctt aaagctctat aaggagctgt acgcccgaga caaacgcttc cagcaattca
1081tccggaaagt gacccgcccc gccgtgctca agcggcacgg ggtacaggag tgcatcctgc
1141tggtgactca gcgcatcacc aagtacccgt tactcatcag ccgcatcctg cagcattccc
1201acgggatcga ggaggagcgc caggacctga ccacagcact ggggctagtg aaggagctgc
1261tgtccaatgt ggacgagggt atttatcagc tggagaaagg ggcccgtctg caggagatct
1321acaaccgcat ggaccctcgg gcccaaaccc cagtgcctgg caagggcccc tttggccgag
1381aggaacttct gaggcgcaaa ctcatccacg atggctgcct gctctggaag acagcgacgg
1441ggcgcttcaa agatgtgcta gtgctgctga tgacagatgt actggtgttt ctccaggaaa
1501aggaccagaa gtacatcttt cctaccctgg acaagccttc agtggtatcg ctgcagaatc
1561taatcgtacg agacattgcc aaccaggaga aagggatgtt tctgatcagc gcagccccac
1621ctgagatgta cgaggtgcac acagcatccc gggatgaccg gagcacctgg atccgggtca
1681ttcagcagag cgtgcgcaca tgcccatcca gggaggactt ccccctgatt gagacagagg
1741atgaggctta cctgcggcga attaagatgg agttgcagca gaaggaccgg gcactggtgg
1801agctgctgcg agagaaggtc gggctgtttg ctgagatgac ccatttccag gccgaagagg
1861atggtggcag tgggatggcc ctgcccaccc tgcccagggg ccttttccgc tctgagtccc
1921ttgagtcccc tcgtggcgag cggctgctgc aggatgccat ccgtgaggtg gagggtctga
1981aagacctgct ggtggggcca ggagtggaac tgctcttgac accccgagag ccagccctgc
2041ccttggaacc agacagcggt ggtaacacga gtcctggggt cactgccaat ggtgaggcca
2101gaaccttcaa tggctccatt gaactctgca gagctgactc agactctagc cagagggatc
2161gaaatggaaa tcagctgaga tcaccgcaag aggaggcgtt acagcgattg gtcaatctct
2221atggacttct acatggccta caggcagctg tggcccagca ggacactctg atggaagccc
2281ggttccctga gggccctgag cggcgggaga agctgtgccg agccaactct cgggatgggg
2341aggctggcag ggctggggct gcccctgtgg cccctgaaaa gcaggccacg gaactggcat
2401tactgcagcg gcaacatgcg ctgctgcagg aggagctacg gcgctgccgg cggctaggtg
2461aagaacgggc aaccgaagct ggcagcctgg aggcccggct ccgggagagt gagcaggccc
2521gggcactgct ggagcgtgag gccgaagagg ctcgaaggca gctggccgcc ctgggccaga
2581ccgagccact cccagctgag gccccctggg cccgcagacc tgtggatcct cggcggcgca
2641gcctccccgc aggcgatgcc ctgtacttga gtttcaaccc cccacagccc agccgaggca
2701ctgaccgcct ggatctacct gtcactactc gctctgtcca tcgaaacttt gaggaccgag
2761agaggcagga actggggagc cccgaagagc ggctgcaaga cagcagtgac cctgacactg
2821gcagcgagga ggaaggtagc agccgtctgt ctccgcccca cagtccacga gactttacca
2881gaatgcagga catcccggag gagacggaga gccgcgacgg ggaggctgta gcctccgaga
2941gctacccaac tttcttgtac aaagtggttg gtaagcctat ccctaaccct ctcctcggtc
3001tcgattctac gtagtaatga gctagcgcta accggtggcg cgttaagtcg acaatcaacc
3061tctggatta

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