Construct: ORF ccsbBroad304_11988

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007525.1_s304c1, BRDN0000460409
Derived from:
ccsbBroadEn_11988
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GULP1 (51454)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_11988
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51454 GULP1 GULP PTB domain containing ... XM_017004308.1 51% 33.3% (many diffs)
2 human 51454 GULP1 GULP PTB domain containing ... NM_001252668.1 50.1% 45.5% (many diffs)
3 human 51454 GULP1 GULP PTB domain containing ... NM_016315.4 48% 43.7% (many diffs)
4 human 51454 GULP1 GULP PTB domain containing ... XM_017004306.1 48% 43.7% (many diffs)
5 human 51454 GULP1 GULP PTB domain containing ... XM_011511335.2 47.8% 31.3% (many diffs)
6 human 51454 GULP1 GULP PTB domain containing ... XM_017004307.1 47.8% 31.3% (many diffs)
7 human 51454 GULP1 GULP PTB domain containing ... XM_006712589.3 45.4% 41.3% (many diffs)
8 human 51454 GULP1 GULP PTB domain containing ... XM_017004303.1 40.1% 36.5% (many diffs)
9 human 51454 GULP1 GULP PTB domain containing ... XM_017004304.2 40.1% 36.5% (many diffs)
10 human 51454 GULP1 GULP PTB domain containing ... XM_017004305.1 40.1% 36.5% (many diffs)
11 human 51454 GULP1 GULP PTB domain containing ... XM_011511329.1 39.1% 35.6% (many diffs)
12 human 51454 GULP1 GULP PTB domain containing ... XM_006712580.4 38.8% 35.3% (many diffs)
13 human 51454 GULP1 GULP PTB domain containing ... XM_006712581.1 38.8% 35.3% (many diffs)
14 human 51454 GULP1 GULP PTB domain containing ... XM_006712582.1 38.8% 35.3% (many diffs)
15 human 51454 GULP1 GULP PTB domain containing ... XM_006712583.4 38.8% 35.3% (many diffs)
16 human 51454 GULP1 GULP PTB domain containing ... XM_006712584.4 38.8% 35.3% (many diffs)
17 human 51454 GULP1 GULP PTB domain containing ... XM_006712585.1 38.8% 35.3% (many diffs)
18 human 51454 GULP1 GULP PTB domain containing ... XM_011511331.1 34.3% 28.1% (many diffs)
19 human 51454 GULP1 GULP PTB domain containing ... XM_011511332.2 31.6% 27.7% (many diffs)
20 human 51454 GULP1 GULP PTB domain containing ... NR_045562.2 13.6% (many diffs)
21 human 51454 GULP1 GULP PTB domain containing ... NR_045563.2 12.6% (many diffs)
22 human 51454 GULP1 GULP PTB domain containing ... XR_002959305.1 8.2% (many diffs)
23 mouse 70676 Gulp1 GULP, engulfment adaptor PT... XM_006496278.3 48% 44.9% (many diffs)
24 mouse 70676 Gulp1 GULP, engulfment adaptor PT... XM_006496277.3 46.8% 43.7% (many diffs)
25 mouse 70676 Gulp1 GULP, engulfment adaptor PT... NM_028450.3 46% 43% (many diffs)
26 mouse 70676 Gulp1 GULP, engulfment adaptor PT... XM_006496276.3 44.9% 42% (many diffs)
27 mouse 70676 Gulp1 GULP, engulfment adaptor PT... XM_011238599.2 44.9% 42% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
567
ORF length:
501
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgaa ccgtgctttt agcaggaaga aagacaaaac atggatgcat acacctgaag
121ctttatcaaa acatttcatt ccctataatg caaagtttct tggcagtaca gaagtggaac
181agccaaaagg aacagaagtt gtgagagatg ctgtaaggaa actaaagttt gcaagacata
241tcaagaaatc tgaaggccag aaaattccta aagtggagtt gcaaatatca atttatggag
301taaaaattct agaacccaaa acaaaggaag ttcaacacaa ttgccagctt catagaatat
361ctttttgtgc agatgataaa actgacaaga ggatattcac tttcatatgc aaagattctg
421agtcaaataa acatttgtgc tatgtatttg acagcgaaaa gtgtgtaagt atcccagatg
481ttgtagggtg gtttgttctg ttttataagc caggaattgt cttgcttctg gcattggcaa
541agtatttgaa aatgaataat tttctgtacc caactttctt gtacaaagtg gttggtaagc
601ctatccctaa ccctctcctc ggtctcgatt ctacgtagta atgagctagc gctaaccggt
661ggcgcgttaa gtcgacaatc aacctctgga tta

Download FASTA (ORF) (Full)