Construct: ORF ccsbBroad304_12168

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016526.1_s304c1, BRDN0000403140
Derived from:
ccsbBroadEn_12168
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RBM23 (55147)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12168
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 55147 RBM23 RNA binding motif protein 23 NM_001352765.2 99.6% 99.7% 360G>A;546C>T;1119_1120insGCC
2 human 55147 RBM23 RNA binding motif protein 23 NM_018107.5 99.6% 99.7% 360G>A;546C>T;1119_1120insGCC
3 human 55147 RBM23 RNA binding motif protein 23 XM_024449643.1 99.6% 99.7% 360G>A;546C>T;1119_1120insGCC
4 human 55147 RBM23 RNA binding motif protein 23 NM_001077351.2 95.9% 95.9% (many diffs)
5 human 55147 RBM23 RNA binding motif protein 23 NM_001352763.2 95.9% 95.9% (many diffs)
6 human 55147 RBM23 RNA binding motif protein 23 NM_001352766.2 95.9% 95.9% (many diffs)
7 human 55147 RBM23 RNA binding motif protein 23 XM_011536897.2 95.5% 95.7% (many diffs)
8 human 55147 RBM23 RNA binding motif protein 23 NM_001077352.2 95.4% 95.5% 352_353ins54;492C>T;1065_1066insGCC
9 human 55147 RBM23 RNA binding motif protein 23 XM_017021410.1 95.4% 95.5% 352_353ins54;492C>T;1065_1066insGCC
10 human 55147 RBM23 RNA binding motif protein 23 XM_024449642.1 93.6% 93.7% (many diffs)
11 human 55147 RBM23 RNA binding motif protein 23 XM_017021403.2 92.6% 92.7% (many diffs)
12 human 55147 RBM23 RNA binding motif protein 23 XM_017021404.1 92.6% 92.7% (many diffs)
13 human 55147 RBM23 RNA binding motif protein 23 XM_017021406.1 92.2% 92.1% (many diffs)
14 human 55147 RBM23 RNA binding motif protein 23 XM_011536900.2 91.9% 91.8% (many diffs)
15 human 55147 RBM23 RNA binding motif protein 23 XM_017021411.1 91.5% 91.6% (many diffs)
16 human 55147 RBM23 RNA binding motif protein 23 XM_011536892.2 90.2% 90.3% (many diffs)
17 human 55147 RBM23 RNA binding motif protein 23 XM_011536893.3 90.2% 90.3% (many diffs)
18 human 55147 RBM23 RNA binding motif protein 23 XM_017021401.2 89.4% 89.4% (many diffs)
19 human 55147 RBM23 RNA binding motif protein 23 XM_017021402.2 89.4% 89.4% (many diffs)
20 human 55147 RBM23 RNA binding motif protein 23 XM_017021400.2 89% 89.2% (many diffs)
21 human 55147 RBM23 RNA binding motif protein 23 XM_017021408.1 88.7% 88.8% (many diffs)
22 human 55147 RBM23 RNA binding motif protein 23 XM_017021409.1 88.3% 88.2% (many diffs)
23 human 55147 RBM23 RNA binding motif protein 23 NM_001352764.2 87.2% 87.1% (many diffs)
24 human 55147 RBM23 RNA binding motif protein 23 XM_011536895.3 86.4% 86.5% (many diffs)
25 human 55147 RBM23 RNA binding motif protein 23 XM_011536896.3 86.4% 86.5% (many diffs)
26 human 55147 RBM23 RNA binding motif protein 23 XM_017021405.2 85.7% 85.5% (many diffs)
27 human 55147 RBM23 RNA binding motif protein 23 XM_017021398.2 84.4% 84.6% (many diffs)
28 human 55147 RBM23 RNA binding motif protein 23 XM_011536894.2 83.6% 83.4% (many diffs)
29 human 55147 RBM23 RNA binding motif protein 23 XM_024449640.1 81.8% 81.7% (many diffs)
30 human 55147 RBM23 RNA binding motif protein 23 XM_017021399.2 80.9% 81% (many diffs)
31 human 55147 RBM23 RNA binding motif protein 23 XM_024449641.1 78.4% 78.2% (many diffs)
32 human 55147 RBM23 RNA binding motif protein 23 XM_024449646.1 69.7% 69.1% (many diffs)
33 human 55147 RBM23 RNA binding motif protein 23 XM_024449645.1 64.8% 64.2% (many diffs)
34 human 55147 RBM23 RNA binding motif protein 23 NM_001308044.2 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
35 human 55147 RBM23 RNA binding motif protein 23 NM_001352762.2 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
36 human 55147 RBM23 RNA binding motif protein 23 XM_011536902.1 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
37 human 55147 RBM23 RNA binding motif protein 23 XM_011536903.1 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
38 human 55147 RBM23 RNA binding motif protein 23 XM_011536904.1 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
39 human 55147 RBM23 RNA binding motif protein 23 XM_011536905.1 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
40 human 55147 RBM23 RNA binding motif protein 23 XM_011536906.1 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
41 human 55147 RBM23 RNA binding motif protein 23 XM_017021420.1 63.3% 63.4% 0_1ins462;84C>T;657_658insGCC
42 human 55147 RBM23 RNA binding motif protein 23 XM_024449644.1 61.4% 61.1% (many diffs)
43 human 55147 RBM23 RNA binding motif protein 23 XM_017021414.1 58.9% 58.9% (many diffs)
44 human 55147 RBM23 RNA binding motif protein 23 XM_017021415.1 58.9% 58.9% (many diffs)
45 human 55147 RBM23 RNA binding motif protein 23 XM_017021416.1 58.9% 58.9% (many diffs)
46 human 55147 RBM23 RNA binding motif protein 23 XM_017021417.1 58.9% 58.9% (many diffs)
47 human 55147 RBM23 RNA binding motif protein 23 XM_017021418.1 58.9% 58.9% (many diffs)
48 human 55147 RBM23 RNA binding motif protein 23 XM_017021419.1 58.9% 58.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1338
ORF length:
1272
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc atctgatgac tttgacatag tgattgaggc catgctggaa gctccctata
121aaaaagaaga ggatgagcaa caaaggaaag aagttaaaaa ggattatcct agcaatacca
181ccagcagcac cagcaacagt ggcaatgaga ccagtggaag cagcaccatc ggggagacaa
241gcaatcgtag tcgagatcgg gatcggtata gacggagaaa tagtcggagc cgaagtccag
301gtcggcagtg tcgtcaccgt agccgtagct gggatcgtcg acatggtagt gagtcgcgaa
361gtcgggacca tcgtcgtgag gatcgtgtgc attacaggag tcctccactt gccactggtt
421atagatatgg acacagtaag agtcctcatt tcagagagaa gagcccagtc agggagccag
481ttgataatct gagtcctgag gagcgtgatg cccgcacagt tttctgtatg cagttagctg
541cccgaattcg gcctcgagat ctggaggact ttttctctgc tgtaggcaag gttcgcgatg
601tacgtatcat ttcagatcgg aactcacgtc gttctaaggg cattgcctac gtggaattct
661gtgaaatcca gtctgtgcca ctggccattg ggctgactgg gcagcggttg ctgggagtgc
721ctatcattgt acaggcttca caggcagaga aaaaccgact ggcagccatg gccaacaacc
781tgcaaaaggg caatggtgga ccaatgcgcc tctatgtggg ttccctgcac ttcaatatca
841ctgaagacat gctccggggc atctttgagc cctttggtaa aattgataat attgtcctga
901tgaaggactc agatacaggc cgctctaaag gttatggttt catcacgttc tctgattctg
961agtgtgcccg gcgggccctg gaacagttga atgggtttga gcttgctggt cgacctatga
1021gggttggcca tgtgactgag cgactggatg gtggcacaga catcactttt cctgatgggg
1081accaggagct ggatctggga tcagcaggtg gacgttttca gctcatggca aaactggcag
1141aaggcgctgg aatccaactg ccaagcactg ctgctgctgc tgctgccgcc gccgccgccc
1201aggctgctgc cttgcaactg aatggagcag ttcccttggg ggccctgaat ccagcagctc
1261tgactgctct gagtccagcc ctgaaccttg cctcccagtg tttccagctc tccagcctct
1321ttacccccca gaccatgtac ccaactttct tgtacaaagt ggttggtaag cctatcccta
1381accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
1441agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.