Construct: ORF ccsbBroad304_12415

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000379.1_s304c1, BRDN0000407615
Derived from:
ccsbBroadEn_12415
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF250 (58500)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12415
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 58500 ZNF250 zinc finger protein 250 NM_001109689.4 91.8% 91.8% 1_135del
2 human 58500 ZNF250 zinc finger protein 250 NM_001363100.2 91.8% 91.8% 1_135del
3 human 58500 ZNF250 zinc finger protein 250 NM_001363101.2 91.8% 91.8% 1_135del
4 human 58500 ZNF250 zinc finger protein 250 NM_001363102.2 91.8% 91.8% 1_135del
5 human 58500 ZNF250 zinc finger protein 250 NM_001363103.2 91.8% 91.8% 1_135del
6 human 58500 ZNF250 zinc finger protein 250 NM_001363098.2 91% 91% 1_150del
7 human 58500 ZNF250 zinc finger protein 250 NM_001363099.2 91% 91% 1_150del
8 human 58500 ZNF250 zinc finger protein 250 NM_021061.5 91% 91% 1_150del
9 human 58500 ZNF250 zinc finger protein 250 XM_024447220.1 91% 91% 1_150del
10 human 58500 ZNF250 zinc finger protein 250 XM_024447221.1 91% 91% 1_150del
11 human 58500 ZNF250 zinc finger protein 250 NM_001363105.2 88.1% 88.1% 1_135del;282_283ins63
12 human 58500 ZNF250 zinc finger protein 250 NM_001363106.2 88.1% 88.1% 1_135del;282_283ins63
13 human 58500 ZNF250 zinc finger protein 250 NM_001363107.2 88.1% 88.1% 1_135del;282_283ins63
14 human 58500 ZNF250 zinc finger protein 250 NM_001363104.2 87.3% 87.3% 1_150del;297_298ins63
15 mouse 239546 Zfp647 zinc finger protein 647 NM_001168276.1 72.8% 76.2% (many diffs)
16 mouse 239546 Zfp647 zinc finger protein 647 NM_172817.3 72.8% 76.2% (many diffs)
17 mouse 239546 Zfp647 zinc finger protein 647 XM_006520928.3 72.8% 76.2% (many diffs)
18 mouse 239546 Zfp647 zinc finger protein 647 XM_006520929.3 72.8% 76.2% (many diffs)
19 mouse 239546 Zfp647 zinc finger protein 647 XM_011245617.2 72.8% 76.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1596
ORF length:
1530
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgat ggaaacctat gggaatgtag tctcattggg acttccagga tccaagcctg
121acataatctc ccagctggag cgaggggaag atccctgggt cctggacagg aagggggcta
181agaagagcca gggcctgtgg agtgactact cagacaacct caaatatgac cacactacag
241cctgtacaca acaagacagt ttatcttgtc catgggaatg tgaaaccaag ggagagagtc
301aaaatacaga cttgagtccg aagccattaa tttcagagca aacagtgatt ctggggaaaa
361cacccttggg gaggattgat caagaaaata atgaaacaaa gcaaagcttc tgtctgagtc
421caaactctgt tgaccaccgt gaagttcagg tcttaagcca aagcatgcca ctcactccgc
481accaggcagt gcctagtgga gagaggccct acatgtgtgt tgagtgtggg aagtgctttg
541gccggagttc ccacctcctt cagcatcagc gtatccacac tggagagaag ccctatgtgt
601gcagtgtatg tgggaaggcc ttcagccaga gctcagtcct tagtaaacac aggagaattc
661acacaggtga gaagccctat gagtgtaatg agtgtggaaa agcctttaga gtgagctcag
721atcttgctca gcatcacaag atacatacag gagagaagcc tcacgaatgt cttgagtgtc
781ggaaagcctt cactcaactc tcacatctca ttcagcacca gcggatccac acgggagaaa
841ggccatatgt gtgtccgttg tgtgggaaag ccttcaacca tagcactgtt ctgcggagcc
901accagagggt acacactggg gagaagcctc acaggtgcaa tgagtgtggg aaaaccttca
961gtgtgaagag gacactgctg cagcaccaga ggatccacac cggggagaag ccctacacgt
1021gcagcgagtg tgggaaggcc ttcagcgacc gctcagtcct cattcagcac cacaacgtgc
1081acaccgggga gaagccctat gagtgcagtg agtgtgggaa gaccttcagc caccgctcca
1141cactgatgaa tcacgagcgg atccacaccg aggaaaagcc ctatgcatgc tacgaatgtg
1201ggaaggcctt cgttcagcac tcacacctga tccagcacca gagagtccac actggggaga
1261agccctatgt gtgtggtgaa tgtgggcacg ccttcagtgc acgccggtct ctgatccagc
1321atgagagaat ccacacaggt gaaaagccct tccagtgcac agaatgtggc aaagccttca
1381gcctgaaagc aactctgatt gtgcacctga ggacccacac gggcgagaag ccatatgagt
1441gcaatagctg cgggaaggcc ttcagccagt actcagtgct catccagcac cagcggatcc
1501acacaggcga gaagccctat gagtgcgggg agtgtgggcg tgccttcaac cagcatggcc
1561acctaatcca gcaccagaaa gtgcacagaa agttgtgccc aactttcttg tacaaagtgg
1621ttggtaagcc tatccctaac cctctcctcg gtctcgattc tacgtagtaa tgagctagcg
1681ctaaccggtg gcgcgttaag tcgacaatca acctctggat ta

Download FASTA (ORF) (Full)