Construct: ORF ccsbBroad304_12494

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007952.1_s304c1, BRDN0000409658
Derived from:
ccsbBroadEn_12494
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TBC1D15 (64786)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12494
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64786 TBC1D15 TBC1 domain family member 15 NM_022771.5 99.9% 99.8% 1621A>G
2 human 64786 TBC1D15 TBC1 domain family member 15 XM_006719565.4 98.6% 98.4% 0_1ins27;2T>A;1594A>G
3 human 64786 TBC1D15 TBC1 domain family member 15 XM_006719564.2 98.1% 97.1% (many diffs)
4 human 64786 TBC1D15 TBC1 domain family member 15 NM_001146213.2 97.4% 97.3% 655_656ins51;1570A>G
5 human 64786 TBC1D15 TBC1 domain family member 15 NM_001146214.2 95.7% 94.7% (many diffs)
6 human 64786 TBC1D15 TBC1 domain family member 15 XM_006719566.3 85.6% 85.5% 0_1ins297;1324A>G
7 human 64786 TBC1D15 TBC1 domain family member 15 XM_011538679.1 85.6% 85.5% 0_1ins297;1324A>G
8 human 64786 TBC1D15 TBC1 domain family member 15 XM_011538680.1 85.6% 85.5% 0_1ins297;1324A>G
9 human 64786 TBC1D15 TBC1 domain family member 15 XM_017019825.1 83.1% 83% 0_1ins297;358_359ins51;1273A>G
10 human 64786 TBC1D15 TBC1 domain family member 15 XM_017019827.1 79.1% 79% 0_1ins432;1189A>G
11 human 64786 TBC1D15 TBC1 domain family member 15 XM_017019828.1 76.6% 76.5% 0_1ins432;223_224ins51;1138A>G
12 human 64786 TBC1D15 TBC1 domain family member 15 XM_011538681.3 65.6% 65.1% (many diffs)
13 human 64786 TBC1D15 TBC1 domain family member 15 XM_006719567.2 64.3% 64.2% 0_1ins738;883A>G
14 human 64786 TBC1D15 TBC1 domain family member 15 XM_011538682.1 64.3% 64.2% 0_1ins738;883A>G
15 human 64786 TBC1D15 TBC1 domain family member 15 NR_027449.2 29.4% (many diffs)
16 mouse 66687 Tbc1d15 TBC1 domain family, member 15 XM_006513957.3 87.5% 91.1% (many diffs)
17 mouse 66687 Tbc1d15 TBC1 domain family, member 15 NM_025706.3 85.1% 88.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2139
ORF length:
2073
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatggc ggcggcgggt gttgtgagcg ggaagattat atatgaacaa gaaggagtat
121atattcactc atcttgtgga aagaccaatg accaagacgg cttgatttca ggaatattac
181gtgttttaga aaaggatgcc gaagtaatag tggactggag accattggat gatgcattag
241attcctctag tattctctat gctagaaagg actccagttc agttgtagaa tggactcagg
301ccccaaaaga aagaggtcat cgaggatcag aacatctgaa cagttacgaa gcagaatggg
361acatggttaa tacagtttca tttaaaagga aaccacatac caatggagat gctccaagtc
421atagaaatgg gaaaagcaaa tggtcattcc tgttcagttt gacagacctg aaatcaatca
481agcaaaacaa agagggtatg ggctggtcct atttggtatt ctgtctaaag gatgacgtcg
541ttctccctgc tctacacttt catcaaggag atagcaaact actgattgaa tctcttgaaa
601aatatgtggt attgtgtgaa tctccacagg ataaaagaac acttcttgtg aattgtcaga
661ataagagtct ttcacagtct tttgaaaatc ttcttgatga gccagcatat ggtttaatac
721aagcaggact gctagacaga agaaagctgt tgtgggccat tcaccactgg aaaaaaatta
781aaaaggaccc ttatacggca actatgatag gattttccaa agtcacaaac tacatttttg
841acagtttgag aggcagcgat ccctctacac atcaacgacc accttcagaa atggcagatt
901ttcttagtga tgctattcca ggtctaaaga taaatcaaca agaagaacca ggatttgaag
961tcatcacaag aattgatttg ggggaacgcc ctgttgttca aaggagagaa ccggtatcac
1021tggaagaatg gactaagaac attgattctg aaggaagaat tttaaatgta gataatatga
1081agcagatgat atttagaggg ggacttagtc atgcattgag aaagcaagca tggaaatttc
1141ttctgggtta ttttccctgg gacagtacca aggaggaaag aacccaatta caaaagcaaa
1201aaactgatga atacttcaga atgaaactgc agtggaaatc catcagccag gaacaagaga
1261aaagaaattc gaggttaaga gattatagaa gtcttatcga aaaagatgtt aacagaacag
1321atcgaacaaa caagttttat gaaggccaag ataatccagg gttgatttta cttcatgaca
1381ttttgatgac ctactgtatg tatgattttg atttaggata tgttcaagga atgagtgatt
1441tactttcccc tcttttatat gtgatggaaa atgaagtgga tgccttttgg tgctttgcct
1501cttacatgga ccaaatgcat cagaattttg aagaacaaat gcaaggcatg aagacccagc
1561taattcagct gagtacctta cttcgattgt tagacagtgg attttgcagt tacttagaat
1621ctcaggactc tggatacctt tatttttgct tcaggtggct tttaatcaga ttcaaaaggg
1681aatttggttt tctagatatt cttcgattat gggaggtaat gtggaccgaa ctaccatgta
1741caaatttcca tcttcttctc tgttgtgcta ttctggaatc agaaaagcag caaataatgg
1801aaaagcatta tggcttcaat gaaatactta agcatatcaa tgaattgtcc atgaaaattg
1861atgtggaaga tatactctgc aaggcagaag caatttctct acagatggta aaatgcaagg
1921aattgccaca agcagtctgt gagatccttg ggcttcaagg cagtgaagtt acaacaccag
1981attcagacgt tggtgaagac gaaaatgttg tcatgactcc ttgtcctaca tctgcatttc
2041aaagtaatgc cttgcctaca ctctctgcca gtggagccag aaatgacagc ccaacacaga
2101taccagtgtc ctcagatgtc tgcagattaa cacctgcatg cccaacttcc ttgtacaaag
2161tggttggtaa gcctatccct aaccctctcc tcggtctcga ttctacgtag taatgagcta
2221gcgctaaccg gtggcgcgtt aagtcgacaa tcaacctctg gatta

Download FASTA (ORF) (Full)

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