Construct: ORF ccsbBroad304_12675

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002397.1_s304c1, BRDN0000405405
Derived from:
ccsbBroadEn_12675
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ABHD18 (80167)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12675
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80167 ABHD18 abhydrolase domain containi... NM_001366048.1 100% 100%
2 human 80167 ABHD18 abhydrolase domain containi... XM_011532278.3 95.3% 95.4% 996_1044delinsG
3 human 80167 ABHD18 abhydrolase domain containi... NM_001319305.2 86.8% 86.9% 454_555del;1098_1146delinsG
4 human 80167 ABHD18 abhydrolase domain containi... NM_001366041.2 82.3% 82.4% 0_1ins135;861_909delinsG
5 human 80167 ABHD18 abhydrolase domain containi... NM_001039717.2 79.2% 78.2% (many diffs)
6 human 80167 ABHD18 abhydrolase domain containi... NM_001366044.1 78.4% 78.4% 0_1ins135;319_420del
7 human 80167 ABHD18 abhydrolase domain containi... NM_001366045.1 78.4% 78.4% 0_1ins135;319_420del
8 human 80167 ABHD18 abhydrolase domain containi... NM_001366047.1 78.4% 78.4% 0_1ins135;319_420del
9 human 80167 ABHD18 abhydrolase domain containi... XM_011532276.2 77.3% 77.3% 1_291del
10 human 80167 ABHD18 abhydrolase domain containi... NM_001366039.2 76.1% 75.3% (many diffs)
11 human 80167 ABHD18 abhydrolase domain containi... NM_001319306.2 75% 75.1% 0_1ins135;319_420del;963_1011delinsG
12 human 80167 ABHD18 abhydrolase domain containi... XM_006714322.3 75% 75.1% 0_1ins135;319_420del;963_1011delinsG
13 human 80167 ABHD18 abhydrolase domain containi... XM_011532274.3 74.5% 74.6% 1_291del;1287_1335delinsG
14 human 80167 ABHD18 abhydrolase domain containi... NM_001366043.1 73.2% 72.3% (many diffs)
15 human 80167 ABHD18 abhydrolase domain containi... NM_001358451.2 70.6% 69.8% (many diffs)
16 human 80167 ABHD18 abhydrolase domain containi... XM_024454227.1 70.6% 69.8% (many diffs)
17 human 80167 ABHD18 abhydrolase domain containi... NM_001366038.2 70.5% 64.9% (many diffs)
18 human 80167 ABHD18 abhydrolase domain containi... NM_001366037.2 70.3% 70.4% 0_1ins261;735_783delinsG
19 human 80167 ABHD18 abhydrolase domain containi... NM_001358454.2 69.2% 69.3% 1_291del;745_846del;1389_1437delinsG
20 human 80167 ABHD18 abhydrolase domain containi... XM_006714320.3 69.2% 69.3% 1_291del;745_846del;1389_1437delinsG
21 human 80167 ABHD18 abhydrolase domain containi... XM_024454226.1 69.2% 69.3% 1_291del;745_846del;1389_1437delinsG
22 human 80167 ABHD18 abhydrolase domain containi... NM_001366046.1 66.9% 66.9% 0_1ins261;193_294del
23 human 80167 ABHD18 abhydrolase domain containi... NM_001319307.2 64% 64.1% 0_1ins261;193_294del;837_885delinsG
24 human 80167 ABHD18 abhydrolase domain containi... NM_001366040.2 64% 64.1% 0_1ins261;193_294del;837_885delinsG
25 human 80167 ABHD18 abhydrolase domain containi... NM_001366042.2 64% 64.1% 0_1ins261;193_294del;837_885delinsG
26 human 80167 ABHD18 abhydrolase domain containi... XM_011532279.2 64% 64.1% 0_1ins261;193_294del;837_885delinsG
27 human 80167 ABHD18 abhydrolase domain containi... NM_025097.2 57.6% 57.6% 0_1ins363;91_192del
28 mouse 269423 Abhd18 abhydrolase domain containi... XM_006500779.3 74.2% 73.9% (many diffs)
29 mouse 269423 Abhd18 abhydrolase domain containi... XM_006500780.3 74.2% 73.9% (many diffs)
30 mouse 269423 Abhd18 abhydrolase domain containi... NM_026622.3 62.1% 62% (many diffs)
31 mouse 269423 Abhd18 abhydrolase domain containi... XM_017319591.1 62.1% 62% (many diffs)
32 mouse 269423 Abhd18 abhydrolase domain containi... XM_006500781.2 56.2% 54.9% (many diffs)
33 mouse 269423 Abhd18 abhydrolase domain containi... XM_017319592.1 56.2% 54.9% (many diffs)
34 mouse 269423 Abhd18 abhydrolase domain containi... XR_001783694.1 31.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1065
ORF length:
996
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gcttgatacc aacttgattc ttctaccttt gttccaattt attgtgccta
121aagaatggaa cagcaaatat agacctgtat gcattcatct tgctggaaca ggagatcatc
181attactggag gcgacgaaca ctaatggccc gtcctatgat taaagaagcc cgaatggctt
241ctttattgtt agaaaaccct tattatggct gcaggaaacc caaggaccaa gtaaggtcca
301gcttaaaaaa tgtgtccgac ctttttgtga tgggaggagc tcttgtttta gaatctgcag
361ctctcttgca ctggctagag agggaaggtt acggcccttt aggaatgact ggaatatcca
421tgggaggaca catggcttcc ttagcggtat ccaactggcc taagcccatg ccattgattc
481catgcctgtc ttggtccaca gcatctgggg tcttcactac gacagattct ttcaaaatgg
541gacaagagtt tgtgaaacac ttcactagca gtgcagacaa gctaactaac cttaatctgg
601tttccagaac tttaaattta gatatatcaa accaagttgt atcccaaaaa cctgctgact
661gccataattc tagcaaaaca tctgtcagtg cgacatcaga aggactctta ttgcaagata
721cctctaagat gaagcgcttc aatcaaacac tttcaaccaa caaaagtggt tatacaagtc
781gcaaccctca gtcataccac ctacttagta aagaacaaag cagaaacagt cttcggaaag
841agtctttaat atttatgaaa ggagtcatgg atgaatgtac tcatgtagca aatttctcag
901tcccagttga tccaagcctc attatagtgg ttcaagccaa agaagatgcc tatattccac
961gaacaggagt tcgaagttta caagaaattt ggcctggttg tgaaatccga tacttagaag
1021ggggtcatat tagtgcttat ctttttaaac aaggactctt caggttgcca actttcttgt
1081acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
1141gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)