Construct: ORF ccsbBroad304_12839

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013784.1_s304c1, BRDN0000404788
Derived from:
ccsbBroadEn_12839
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LOXL3 (84695)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_12839
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84695 LOXL3 lysyl oxidase like 3 NM_001289164.3 100% 100%
2 human 84695 LOXL3 lysyl oxidase like 3 NM_032603.5 80.7% 80.7% 475_909del
3 human 84695 LOXL3 lysyl oxidase like 3 XM_011533134.2 80.7% 80.7% 475_909del
4 human 84695 LOXL3 lysyl oxidase like 3 XM_024453176.1 80.7% 80.7% 475_909del
5 human 84695 LOXL3 lysyl oxidase like 3 XM_024453177.1 80.7% 80.7% 475_909del
6 human 84695 LOXL3 lysyl oxidase like 3 XM_024453178.1 80.7% 80.7% 475_909del
7 human 84695 LOXL3 lysyl oxidase like 3 NM_001289165.2 64.4% 64.4% 0_1ins648
8 human 84695 LOXL3 lysyl oxidase like 3 XM_017005112.1 64.4% 64.4% 0_1ins648
9 mouse 16950 Loxl3 lysyl oxidase-like 3 NM_013586.4 71.8% 76% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1890
ORF length:
1824
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgcg acctgtcagt gtctggcagt ggagcccctg ggggctgctg ctgtgcctgc
121tgtgcagttc gtgcttgggg tctccgtccc cttccacggg ccctgagaag aaggccggga
181gccaggggct tcggttccgg ctggctggct tccccaggaa gccctacgag ggccgcgtgg
241agatacagcg agctggtgaa tggggcacca tctgcgatga tgacttcacg ctgcaggctg
301cccacatcct ctgccgggag ctgggcttca cagaggccac aggctggacc cacagtgcca
361aatatggccc tggaacaggc cgcatctggc tggacaactt gagctgcagt gggaccgagc
421agagtgtgac tgaatgtgcc tcccggggct gggggaacag tgactgtacg cacgatgagg
481atgctggggt catctgcaaa gaccagcgcc tccctggctt ctcggactcc aatgtcattg
541aggcccgtgt ccgtctaaag ggcggcgccc accctggaga gggccgggta gaagtcctga
601aggccagcac atggggcaca gtctgtgacc gcaagtggga cctgcatgca gccagcgtgg
661tgtgtcggga gctgggcttc gggagtgctc gagaagctct gagtggcgct cgcatggggc
721agggcatggg tgctatccac ctgagtgaag ttcgctgctc tggacaggag ctctccctct
781ggaagtgccc ccacaagaac atcacagctg aggattgttc acatagccag gatgccgggg
841tccggtgcaa cctaccttac actggggcag agaccaggat ccgactcagt gggggccgca
901gccaacatga ggggcgagtc gaggtgcaaa tagggggacc tgggcccctt cgctggggcc
961tcatctgtgg ggatgactgg gggaccctgg aggccatggt ggcctgtagg caactgggtc
1021tgggctacgc caaccacggc ctgcaggaga cctggtactg ggactctggg aatataacag
1081aggtggtgat gagtggagtg cgctgcacag ggactgagct gtccctggat cagtgtgccc
1141atcatggcac ccacatcacc tgcaagagga cagggacccg cttcactgct ggagtcatct
1201gttctgagac tgcatcagat ctgttgctgc actcagcact ggtgcaggag accgcctaca
1261tcgaagaccg gcccctgcat atgttgtact gtgctgcgga agagaactgc ctggccagct
1321cagcccgctc agccaactgg ccctatggtc accggcgtct gctccgattc tcctcccaga
1381tccacaacct gggacgagct gacttcaggc ccaaggctgg gcgccactcc tgggtgtggc
1441acgagtgcca tgggcattac cacagcatgg acatcttcac tcactatgat atcctcaccc
1501caaatggcac caaggtggct gagggccaca aagctagttt ctgtctcgaa gacactgagt
1561gtcaggagga tgtctccaag cggtatgagt gtgccaactt tggagagcaa ggcatcactg
1621tgggttgctg ggatctctac cggcatgaca ttgactgtca gtggattgac atcacggatg
1681tgaagccagg aaactacatt ctccaggttg tcatcaaccc aaactttgaa gtagcagaga
1741gtgactttac caacaatgca atgaaatgta actgcaaata tgatggacat agaatctggg
1801tgcacaactg ccacattggt gatgccttca gtgaagaggc caacaggagg tttgaacgct
1861accctggcca gaccagcaac cagattatct acccaacttt cttgtacaaa gtggttggta
1921agcctatccc taaccctctc ctcggtctcg attctacgta gtaatgagct agcgctaacc
1981ggtggcgcgt taagtcgaca atcaacctct ggatta

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