Construct: ORF ccsbBroad304_13686

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015648.1_s304c1, BRDN0000460438
Derived from:
ccsbBroadEn_13686
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM41B (440026)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_13686
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 440026 TMEM41B transmembrane protein 41B NM_001165030.3 65.2% 64% (many diffs)
2 human 440026 TMEM41B transmembrane protein 41B NM_015012.4 64.6% 43.9% 368_369insTTACCAG;570_873del
3 human 440026 TMEM41B transmembrane protein 41B NR_028491.3 38.5% 1_152del;520_521insTTACCAG;722_1469del
4 human 440026 TMEM41B transmembrane protein 41B XR_930870.1 37.9% 1_192del;769_1516del
5 human 440026 TMEM41B transmembrane protein 41B XR_001747881.1 14.9% 1_192del;769_3845del
6 mouse 233724 Tmem41b transmembrane protein 41B NM_153525.5 55.6% 36.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
645
ORF length:
576
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggcgaaaggc agagtcgccg aacgatcgca gttgggcgct caccacacga
121cccccgtggg ggacggggca gcggggacgc ggggtctcgc ggcgcctggc agcagagacc
181accagaagga aaaatcctgg gtagaagctg gatcagcaag aatgtcactc cttatattgg
241tgtccatttt cttatctgca gcttttgtta tgtttttggt atataaaaat tttcctcagc
301ttagtgaaga agaaagagtg aatatgaagg ttcccagaga tatggatgat gccaaggctc
361taggaaaagt tttatccaaa tacaaggaca ccttttatgt tcaagtactt gtagcttatt
421ttgctacata tattttttac cagcttgcaa acatttgcta ttccaggctc tatatttctc
481agtatactct cagggtttct ttatcccttt ccactagcct tatttcttgt ttgtttgtgt
541tctggacttg gtgcctcttt ctgttatatg ctttcctatt tagttgggag accagttgta
601tacaaatacc taacagagaa agcagtaaaa tggtcacagc aggtttgcca actttcttgt
661acaaagtggt tggtaagcct atccctaacc ctctcctcgg tctcgattct acgtagtaat
721gagctagcgc taaccggtgg cgcgttaagt cgacaatcaa cctctggatt a

Download FASTA (ORF) (Full)