Construct: ORF ccsbBroad304_14466

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002821.1_s304c1, BRDN0000410959
Derived from:
ccsbBroadEn_14466
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to frame shift)
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CEP57L1 (285753)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_14466
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350665.1 99.8% 98.4% 741delA
2 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350666.1 93.4% 92% 338_339ins48;693delA
3 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_011535763.2 81.7% 81.3% (many diffs)
4 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001271853.2 63.7% 63.1% (many diffs)
5 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_024446405.1 63.7% 63.1% (many diffs)
6 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_024446406.1 59.6% 59% (many diffs)
7 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001083535.2 54.1% 53.6% (many diffs)
8 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001271852.2 54.1% 53.6% (many diffs)
9 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350652.1 54.1% 53.6% (many diffs)
10 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350653.1 54.1% 53.6% (many diffs)
11 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_173830.5 54.1% 53.6% (many diffs)
12 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_017010769.1 53.8% 53.3% (many diffs)
13 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350654.1 52.2% 51.7% (many diffs)
14 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350655.1 52.2% 51.7% (many diffs)
15 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350656.1 52.2% 51.7% (many diffs)
16 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350657.1 52.2% 51.7% (many diffs)
17 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350658.1 52.2% 51.7% (many diffs)
18 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_006715462.3 52.2% 51.7% (many diffs)
19 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_017010768.2 52.2% 51.7% (many diffs)
20 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_024446404.1 51.9% 51.4% (many diffs)
21 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_005266938.4 50% 49.5% (many diffs)
22 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350659.1 48.9% 48.4% (many diffs)
23 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_005266935.5 48.4% 47.9% (many diffs)
24 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_005266936.4 48.4% 47.9% (many diffs)
25 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_005266937.4 45.3% 44.8% (many diffs)
26 human 285753 CEP57L1 centrosomal protein 57 like 1 NR_146889.1 28.6% (many diffs)
27 human 285753 CEP57L1 centrosomal protein 57 like 1 NR_146888.1 25.4% (many diffs)
28 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350662.1 24.2% 23.6% (many diffs)
29 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350663.1 24.2% 23.6% (many diffs)
30 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350664.1 24.2% 23.6% (many diffs)
31 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350660.1 23.3% 22.8% (many diffs)
32 human 285753 CEP57L1 centrosomal protein 57 like 1 NM_001350661.1 23.3% 22.8% (many diffs)
33 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_011535762.2 20.5% 19.4% (many diffs)
34 human 285753 CEP57L1 centrosomal protein 57 like 1 XM_017010771.1 20.5% 19.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
819
ORF length:
753
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgga ttctgaatta atgcatagta tagtaggaag ctatcataaa cctccagaaa
121gagtatttgt tccctcattc acccagaatg aaccatctca gaattgccat cctgcaaact
181tagaagttac ctctcctaag atacttcata gcccaaatag ccaagctctt attttagcct
241taaaaactct tcaggaaaaa attcatcgtt tagagctgga gagaacacaa gctgaagata
301acctgaacat tctttccaga gaagcagcac agtataagaa ggccttagag aatgaaacaa
361atgagagaaa tctggcacac caggagctga taaagcagaa aaaagatata agtatacagt
421taagctcagc ccagtctcgt tgtactcttc tagagaagca actagaatat acaaagagaa
481tggttctcaa cgtagagcga gaaaagaaca tgatcctaga acaacaggcc cagcttcaga
541gggaaaaaga acaagatcag atgaagctgt atgcaaaact tgaaaagctt gatgtcttag
601aaaaagagtg tttcagactt acaacaactc agaaaactgc tgaggacaag attaaacatt
661tagaagaaaa acttaaggaa gaagaacatc agcgtaagct atttcaagac aaagcttctg
721agcttcaaac tggacttgaa atcagtaaaa ttataatgtc ttcagtttca aatctaaagc
781actccaagga aaagaagaaa tcttcaaggt gtgcatatac ccaactttct tgtacaaagt
841ggttggtaag cctatcccta accctctcct cggtctcgat tctacgtagt aatgagctag
901cgctaaccgg tggcgcgtta agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)