Construct: ORF ccsbBroad304_15041

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018897.1_s304c1, BRDN0000459381
Derived from:
ccsbBroadEn_15041
DNA Barcode:
None
Epitope Tag:
V5 (not translated due to prior stop codon)
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
STK36 (27148)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15041
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 27148 STK36 serine/threonine kinase 36 NM_001369423.1 99.4% 19.4% (many diffs)
2 human 27148 STK36 serine/threonine kinase 36 NM_015690.5 99.4% 19.4% (many diffs)
3 human 27148 STK36 serine/threonine kinase 36 XM_011510959.2 98.7% 19.6% (many diffs)
4 human 27148 STK36 serine/threonine kinase 36 NM_001243313.2 97.8% 19.7% (many diffs)
5 human 27148 STK36 serine/threonine kinase 36 XM_017003804.2 97.8% 19.7% (many diffs)
6 human 27148 STK36 serine/threonine kinase 36 XM_011510960.1 95.3% 15.3% (many diffs)
7 human 27148 STK36 serine/threonine kinase 36 XR_922904.2 62.7% (many diffs)
8 human 27148 STK36 serine/threonine kinase 36 XM_011510961.1 59.3% 7.9% (many diffs)
9 human 27148 STK36 serine/threonine kinase 36 XM_017003805.2 59.3% 7.9% (many diffs)
10 human 27148 STK36 serine/threonine kinase 36 XR_001738704.2 57.8% (many diffs)
11 mouse 269209 Stk36 serine/threonine kinase 36 XM_006496039.1 85.3% 19% (many diffs)
12 mouse 269209 Stk36 serine/threonine kinase 36 NM_175031.3 85.3% 19% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
915
ORF length:
846
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat ggaaaagtac cacgtgttgg agatgattgg agaaggctct tttgggaggg
121tgtacaaggg tcgaagaaaa tacagtgctc aggtcgtggc cctgaagttc atcccaaaat
181tggggcgctc agagaaggag ctgaggaatt tgcaacgaga gattgaaata atgcggggtc
241tgcggcatcc caacattgtg catatgcttg acagctttga aactgataaa gaggtggtgg
301tggtgacaga ctatgctgag ggagagctct ttcagatcct agaagatgac ggaaaacttc
361ctgaagacca ggttcaggcc attgctgccc agttggtgtc agccctgtac tatctgcatt
421cccaccgcat cctacaccga gatatgaagc ctcagaacat cctcctcgcc aagggtggtg
481gcatcaagct ctgtgacttt ggatttgccc gggctatgag caccaataca atggtgctga
541catccatcaa aggcacacca ctctatatgt ctccagagct ggtggaggag cgaccatacg
601accacacagc ggacctctgg tctgttggct gcatactata tgaactggca gtaggcaccc
661ctcccttcta tgctacaagc atctttcagc tggtcagcct cattctcaag gaccctgtgc
721gctggccctc aaccatcagt ccctgcttta agaacttcct gcaggactgc tcaccaagac
781ccacggcagc gactgtcctg gccagacctc ttatatcacc ctttattgct ggtcatgtca
841ccataataac tgagccagca ggcccagaat ttggggaccc cattcaccag cgctaccccc
901agaacttcag gtcctaaagg acgaacaggc ccatcggttg gcccccaagg gtaatcagtc
961tcgcatcttg actcaggcct ataaacgcat ggctgaggag gccatgcaga agaaacatca
1021gaacacagga cctgcccttg agcaagagga caagaccagc aaggtggctc ctggcacagc
1081ccctctgccc agactcgggg ccactcctca ggaatcaagc ctcctggccg ggatcttagc
1141ctcagaattg aagagcagct gggctaaatc agggactgga gaggtgccct ctgcacctcg
1201ggaaaaccgg accaccccag attgtgaacg agcattccca gaggagaggc cagaggtgct
1261gggccagcgg agcactgatg tagtggacct ggaaaatgag gagccagaca gtgacaatga
1321gtggcagcac ctgctagaga ccactgagcc tgtgcctatt caactgaagg ctcctctcac
1381cttgctgtgt aatcctgact tctgccagcg catccagagt cagctgcatg aagctggagg
1441gcagatcctg aatggcatct tggagggtgc ttcccacatc ctgcctgcat tccgggtcct
1501gagcagtctt ctctccagct gcagtgattc tgttgccttg tattccttct gccgggaggc
1561agggcttcct gggctgctgc tgagtctact caggcacagt caggagagca acagcctcca
1621gcagcaatct tggtatggga ccttcttaca ggacctgatg gctgtgattc aggcctactt
1681tgcctgtacc ttcaatctgg agaggagcca gacaagtgac agcctgcagg tgtttcagga
1741ggctgccaac ctttttctgg acctgttggg gaaactgctg gcccaaccag atgactctga
1801gcagactttg cggagggaca gccttatgtg ctttactgtc ctgtgcgaag ccatggatgg
1861gaacagccgg gccatctcca aagcctttta ctccagcttg ctgacgacac agcaggttgt
1921cttggatggg ctccttcatg gcttgacagt tccacagctc cctgtccaca ctccccaagg
1981agccccgcaa gtgagccagc cactgcgaga gcagagtgag gatatacctg gagccatttc
2041ctctgccctg gcagccatat gcactgctcc tgtgggactg cccgactgct gggatgccaa
2101ggagcaggtc tgttggcatt tggcaaatca gctaactgaa gacagcagcc agctcaggcc
2161atccctcatc tctggcctgc agcatcccat cctgtgcctg caccttctca aggttctata
2221ctcctgctgc cttgtcagtg agggcctgtg ccgtcttctg gggcaggagc ccctggcctt
2281ggaatccctg tttatgttga ttcagggcaa ggtaaaagta gtagattggg aagagtctac
2341tgaagtgaca ctctacttcc tcacccttct tgtctttcgg ctccaaaacc tgccttgtgg
2401aatggagaag ctaggcagtg acgttgctac tctctttacc cattcgcatg tcgtctctct
2461tgtgagtgca gcagcctgtc tattgggaca gcttggtcag caaggggtga cctttgacct
2521ccagcccatg gaatggatgg ctgcagccac acatgccttg tctgcccctg cagaggttcg
2581gttgactcca ccaggtagtt gtggattcta tgatggcctc cttatccttc tgttgcagct
2641cctcactgag caggggaagg ctagcctaat cagggatatg tccagttcag aaatgtggac
2701cgttttgtgg caccgcttct ccatggtcct gaggctcccc gaggaggcat ctgcacagga
2761aggggagctt tcgctatcca gtccaccaag ccctgagcca gactggacac tgatttctcc
2821ccagggcatg gcagccctgc tgagcctggc catggccacc tttacccagg agccccagtt
2881atgcctgagc tgcctgtccc agcatggaag tatcctcatg tccatcctga agcatctgct
2941ttgccccagc ttcctgaatc aactgcgcca ggcgcctcat gggtctgagt ttctccctgt
3001cgtggtgctc tctgtctgcc agctcctttg cttccccttt gcgctggaca tggatgctga
3061cctccttata ggtgtcttgg ccgacctcag ggactcagaa gttgcagccc atctgctgca
3121ggtctgctgc taccatcttc cgttgatgca agtggagctg cccatcagcc ttctcacacg
3181cctggccctc atggatccca cctcttttaa accagttggt gaacacagtt ttgccttccc
3241ctagaaccca tcgtctcgtt tctctcagtg ccctcctgag tgaccagcca ctgttgactt
3301ccgactttct ctctctgctg ccccatactg ccagggtcct gtctcccagc cacttgtcct
3361ttatccaaga gcttctggct ggctctgatg aatcctatcg gcccctgcgc agcctcctgg
3421gccacccaga gaattctgtg cgggcacaca cttataggct cctgggacac ttgctccaac
3481acagcatggc cctgcgtggg gcactgcaga gccagtctgg actgctcagc cttctgctgc
3541ttgggcttgg agacaaggat cctgttgtgc ggtgcagtgc cagctttgct gtgggcaatg
3601cagcctacca ggctggtcct ctgggacctg ccctggcagc tgcagtgccc agtatgaccc
3661agctgcttgg agatcctcag gctggtatcc ggcgcaatgt tgcatcagct ctgggcaact
3721tgggacctga aggtttggga gaggagctgt tacagtgcga agtaccccag cggctcctag
3781aaatggcatg tggagacccc cagccaaatg tgaaggaggc tgccctcatt gccctccgga
3841gcctgcaaca ggagcctggc atccatcagg tactggtgtc cctgggtgcc agtgagaaac
3901tatccttgct ctctctgggg aatcagtcac tgccacacag cagtcctagg cctgcctctg
3961ccaaacactg caggaaactc attcacctcc tgaggccagc ccatagcatg ttgccaactt
4021tcttgtacaa agtggttggt aagcctatcc ctaaccctct cctcggtctc gattctacgt
4081agtaatgagc tagcgctaac cggtggcgcg ttaagtcgac aatcaacctc tggatta

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