Construct: ORF ccsbBroad304_15503

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012748.1_s304c1, BRDN0000401876
Derived from:
ccsbBroadEn_15503
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MYH7 (4625)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15503
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4625 MYH7 myosin heavy chain 7 NM_000257.4 100% 100%
2 human 4625 MYH7 myosin heavy chain 7 XM_017021340.1 100% 100%
3 human 4624 MYH6 myosin heavy chain 6 NM_002471.3 90.4% 92.6% (many diffs)
4 mouse 140781 Myh7 myosin, heavy polypeptide 7... NM_080728.2 91.9% 97.5% (many diffs)
5 mouse 140781 Myh7 myosin, heavy polypeptide 7... XM_017315841.1 91.9% 97.5% (many diffs)
6 mouse 140781 Myh7 myosin, heavy polypeptide 7... XM_017315842.1 91.9% 97.5% (many diffs)
7 mouse 17888 Myh6 myosin, heavy polypeptide 6... NM_001164171.1 87.6% 92% (many diffs)
8 mouse 17888 Myh6 myosin, heavy polypeptide 6... NM_010856.4 87.6% 92% (many diffs)
9 mouse 17888 Myh6 myosin, heavy polypeptide 6... XM_006518677.1 87.6% 91.9% (many diffs)
10 mouse 17888 Myh6 myosin, heavy polypeptide 6... XM_006518678.3 87.6% 91.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
5874
ORF length:
5805
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcaccat gggagattcg gagatggcag tctttggggc tgccgccccc tacctgcgca
121agtcagagaa ggagcggcta gaagcgcaga ccaggccttt tgacctcaag aaggatgtct
181tcgtgcctga tgacaaacag gagtttgtca aggccaagat cgtgtctcga gagggtggca
241aagtcactgc cgagaccgag tatggcaaga cagtgaccgt gaaggaggac caggtgatgc
301agcagaaccc acccaagttc gacaaaatcg aggacatggc catgctgacc ttcctgcatg
361agcccgcggt gctctacaac ctcaaggatc gctacggctc ctggatgatc tacacctact
421cgggcctctt ctgtgtcacc gtcaaccctt acaagtggct gccggtgtac actcctgagg
481tggtggctgc ctaccggggc aagaagagga gcgaggcccc gccccacatc ttctccatct
541ccgacaacgc ctatcagtac atgctgacag acagagaaaa ccagtccatc ctgatcaccg
601gagaatccgg agcagggaag acagtcaaca ccaagagggt catccagtac tttgctgtta
661ttgcagccat tggggaccgc agcaagaagg accagagccc gggcaagggc accctggagg
721accagatcat ccaggccaac cctgctctgg aggcctttgg caatgccaag accgtccgga
781acgacaactc ctcccgcttc gggaaattca ttcgaattca ttttggggca acaggaaagt
841tggcatctgc agacatagag acctatcttc tggaaaaatc cagagttatt ttccagctga
901aagcagagag agattatcac attttctacc aaatcctgtc taacaaaaag cctgagctgc
961tggacatgct gctgatcacc aacaacccct acgattatgc attcatctcc caaggagaga
1021ccaccgtggc ctccattgat gacgctgagg agctcatggc cactgataac gcttttgatg
1081tgctgggctt cacttcagag gagaaaaact ccatgtataa gctgacaggc gccatcatgc
1141actttggaaa catgaagttc aagctgaagc agcgggagga gcaggcggag ccagacggca
1201ctgaagaggc tgacaagtct gcctacctca tggggctgaa ctcagccgac ctgctcaagg
1261ggctgtgcca ccctcgggtg aaagtgggca atgagtacgt caccaagggg cagaatgtcc
1321agcaggtgat atatgccact ggggcactgg ccaaggcagt gtatgagagg atgttcaact
1381ggatggtgac gcgcatcaat gccaccctgg agaccaagca gccacgccag tacttcatag
1441gagtcctgga catcgctggc ttcgagatct tcgatttcaa cagctttgag cagctctgca
1501tcaacttcac caacgagaag ctgcagcagt tcttcaacca ccacatgttt gtgctggagc
1561aggaggagta caagaaggag ggcatcgagt ggacattcat tgactttggc atggacctgc
1621aggcctgcat tgacctcatc gagaagccca tgggcatcat gtccatcctg gaagaggagt
1681gcatgttccc caaggccacc gacatgacct tcaaggccaa gctgtttgac aaccacctgg
1741gcaaatccgc caacttccag aagccacgca atatcaaggg gaagcctgaa gcccacttct
1801ccctgatcca ctatgccggc atcgtggact acaacatcat tggctggctg cagaagaaca
1861aggatcctct caatgagact gtcgtgggct tgtatcagaa gtcttccctc aagctgctca
1921gcaccctgtt tgccaactat gctggggctg atgcgcctat tgagaagggc aaaggcaagg
1981ccaagaaagg ctcgtccttt cagactgtgt cagctctgca cagggaaaat ctgaacaagc
2041tgatgaccaa cttgcgctcc acccatcccc actttgtacg ttgtatcatc cctaatgaga
2101caaagtctcc aggggtgatg gacaaccccc tggtcatgca ccagctgcgc tgcaatggtg
2161tgctggaggg catccgcatc tgcaggaaag gcttccccaa ccgcatcctc tacggggact
2221tccggcagag gtatcgcatc ctgaacccag cggccatccc tgagggacag ttcattgata
2281gcaggaaggg ggcagagaag ctgctcagct ccctggacat tgatcacaac cagtacaagt
2341ttggccacac caaggtgttc ttcaaggccg ggctgctggg gctgctggag gaaatgaggg
2401acgagaggct gagccgcatc atcacgcgta tccaggccca gtcccgaggt gtgctcgcca
2461gaatggagta caaaaagctg ctggaacgta gagactccct gctggtaatc cagtggaaca
2521ttcgggcctt catgggggtc aagaattggc cctggatgaa gctctacttc aagatcaagc
2581cgctgctgaa gagtgcagaa agagagaagg agatggcctc catgaaggag gagttcacac
2641gcctcaaaga ggcgctagag aagtccgagg ctcgccgcaa ggagctggag gagaagatgg
2701tgtccctgct gcaggagaag aatgacctgc agctccaagt gcaggcggaa caagacaacc
2761tggcagatgc tgaggagcgc tgtgatcagc tgatcaaaaa caagattcag ctggaggcca
2821aggtgaagga gatgaacgag aggctggagg atgaggagga gatgaatgct gagctcactg
2881ccaagaagcg caagctggaa gatgagtgct cagagctcaa aagggacatc gatgatctgg
2941agctgacact ggccaaagtg gagaaggaga aacacgcaac agagaacaag gtgaaaaacc
3001tgacagagga gatggctggg ctggatgaga tcattgccaa gctgaccaag gagaagaaag
3061ctctgcaaga ggcccaccaa caggctctgg atgaccttca ggccgaggag gacaaggtca
3121acaccctgac taaggccaaa gtcaagctgg agcagcaagt ggatgatctg gaaggatccc
3181tggagcaaga gaagaaggtg cgcatggacc tggagcgagc gaagcggaag ctggagggcg
3241acctgaagct gacccaggag agcatcatgg acctggagaa tgacaagcag cagctggatg
3301agcggctgaa aaaaaaagac tttgagctga atgctctcaa cgcaaggatt gaggatgaac
3361aggccctcgg cagccagctg cagaagaagc tcaaggagct tcaggcacgc atcgaggagc
3421tggaggagga gctggaggcc gagcgcaccg ccagggctaa ggtggagaag ctgcgctcag
3481acctgtctcg ggagctggag gagatcagcg agcggctgga agaggccggc ggggccacgt
3541ccgtgcagat cgagatgaac aagaagcgcg aggccgagtt ccagaagatg cggcgggacc
3601tggaggaggc cacgctgcag cacgaggcca ctgccgcggc cctgcgcaag aagcacgccg
3661acagcgtggc cgagctgggc gagcagatcg acaacctgca gcgggtgaag cagaagctgg
3721agaaggagaa gagcgagttc aagctggagc tggatgacgt cacctccaac atggagcaga
3781tcatcaaggc caaggctaac ctggagaaga tgtgccggac cttggaagac cagatgaatg
3841agcaccggag caaggcggag gagacccagc gttctgtcaa cgacctcacc agccagcggg
3901ccaagttgca aaccgagaat ggtgagctgt cccggcagct ggatgagaag gaggcactga
3961tctcccagct gacccgaggc aagctcacct acacccagca gctggaggac ctcaagaggc
4021agctggagga ggaggttaag gcgaagaacg ccctggccca cgcactgcag tcggcccggc
4081atgactgcga cctgctgcgg gagcagtacg aggaggagac ggaggccaag gccgagctgc
4141agcgcgtcct ttccaaggcc aactcggagg tggcccagtg gaggaccaag tatgagacgg
4201acgccattca gcggactgag gagctcgagg aggccaagaa gaagctggcc cagcggctgc
4261aggaagctga ggaggccgtg gaggctgtta atgccaagtg ctcctcgctg gagaagacca
4321agcaccggct acagaatgag atcgaggact tgatggtgga cgtagagcgc tccaatgctg
4381ctgctgcagc cctggacaag aagcagagga acttcgacaa gatcctggcc gagtggaagc
4441agaagtatga ggagtcgcag tcggagctgg agtcctcgca gaaggaggct cgctccctca
4501gcacagagct cttcaaactc aagaacgcct atgaggagtc cctggaacat ctggagacct
4561tcaagcggga gaacaaaaac ctgcaggagg agatctccga cttgactgag cagttgggtt
4621ccagcggaaa gactatccat gagctggaga aggtccgaaa gcagctggag gccgagaaga
4681tggagctgca gtcagccctg gaggaggccg aggcctccct ggagcacgag gagggcaaga
4741tcctccgggc ccagctggag ttcaaccaga tcaaggcaga gatcgagcgg aagctggcag
4801agaaggacga ggagatggaa caggccaagc gcaaccacct gcgggtggtg gactcgctgc
4861agacctccct ggacgcagag acacgcagcc gcaacgaggc cctgagggtg aagaagaaga
4921tggaaggaga cctcaatgag atggagatcc agctcagcca cgccaaccgc atggccgccg
4981aggcccagaa gcaagtcaag agcctccaga gcttgttgaa ggacacccag attcagctgg
5041acgatgcagt ccgtgccaac gacgacctga aggagaacat cgccatcgtg gagcggcgca
5101acaacctgct gcaggctgag ctggaggagt tgcgtgccgt ggtggagcag acagagcggt
5161cccggaagct ggcggagcag gagctgattg agactagtga gcgggtgcag ctgctgcatt
5221cccagaacac cagcctcatc aaccagaaga agaagatgga tgctgacctg tcccagctcc
5281agactgaagt ggaggaggca gtgcaggagt gcaggaatgc tgaggagaag gccaagaagg
5341ccatcacgga tgccgccatg atggcagagg agctgaagaa ggagcaggac accagcgccc
5401acctggagcg catgaagaag aacatggaac agaccattaa ggacctgcag caccggctgg
5461acgaagccga gcagatcgcc ctcaagggcg gcaagaagca gctgcagaag ctggaagcgc
5521gggtgcggga gctggagaat gagctggagg ccgagcagaa gcgcaacgca gagtcggtga
5581agggcatgag gaagagcgag cggcgcatca aggagctcac ctaccagacg gaggaggaca
5641ggaaaaacct gctgcggctg caggacctgg tagacaagct gcagctaaag gtcaaggcct
5701acaagcgcca ggccgaggag gcggaggagc aagccaacac caacctgtcc aagttccgca
5761aggtgcagca cgagctggat gaggcagagg agcgggcgga catcgccgag tcccaggtca
5821acaagctgcg ggccaagagc cgtgacattg gcacgaaggg cttgaatgag gagtnnccaa
5881ctttcttgta caaagtggtt ggtaagccta tccctaaccc tctcctcggt ctcgattcta
5941cgtagtaatg agctagcgct aaccggtggc gcgttaagtc gacaatcaac ctctggatta

Download FASTA (ORF) (Full)

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