Construct: ORF ccsbBroad304_15857

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017018.1_s304c1, BRDN0000408902
Derived from:
ccsbBroadEn_15857
DNA Barcode:
None
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MYOZ2 (51778)

Vector Information:

Vector Backbone:
pLX_304
Pol II Cassette 1:
PGK-BlastR
Pol II Cassette 2:
CMV-ccsbBroad304_15857
Selection Marker:
BlastR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51778 MYOZ2 myozenin 2 NM_016599.5 99.8% 100% 237A>G
2 human 51778 MYOZ2 myozenin 2 XM_006714234.4 72.7% 71.9% (many diffs)
3 mouse 59006 Myoz2 myozenin 2 NM_021503.2 86.9% 88.2% (many diffs)
4 mouse 59006 Myoz2 myozenin 2 XM_006501828.3 77.3% 79.9% (many diffs)
5 mouse 59006 Myoz2 myozenin 2 XM_006501829.3 77.3% 79.9% (many diffs)
6 mouse 59006 Myoz2 myozenin 2 XM_006501830.3 59.3% 60.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
858
ORF length:
792
Sequence:
1ggtctatata agcagagctc tctggctaac tgtcgggatc aacaagtttg tacaaaaaag
61ttggcatgct atcacataat actatgatga agcagagaaa acagcaagca acagccatca
121tgaaggaagt ccatggaaat gatgttgatg gcatggacct gggcaaaaag gtcagcatcc
181ccagagacat catgttggaa gaattatccc atctcagtaa ccgtggtgcc aggctattta
241agatgcgtca aagaagatct gacaaataca catttgaaaa tttccagtat caatctagag
301cgcaaataaa tcacagtatt gctatgcaga atgggaaagt ggatggaagt aacttggaag
361gtggttcgca gcaagccccc ttgactcctc ccaacacccc agatccacga agccctccaa
421atccagacaa cattgctcca ggatattctg gaccactgaa ggaaattcct cctgaaaaat
481tcaacaccac agctgtccct aagtactatc aatctccctg ggaacaagcc attagcaatg
541atccggagct tttagaggct ttatatccta aacttttcaa gcctgaagga aaggcagaac
601tgcctgatta caggagcttt aacagggttg ccacaccatt tggaggtttt gaaaaagcat
661caagaatggt taaatttaaa gttccagatt ttgagctact attgctaaca gatcccaggt
721ttatgtcctt tgtcaatccc ctttctggca gacggtcctt taataggact cctaagggat
781ggatatctga gaatattcct atagtgataa caaccgaacc tacagatgat accactgtac
841cagaatcaga agacctatnn ccaactttct tgtacaaagt ggttggtaag cctatcccta
901accctctcct cggtctcgat tctacgtagt aatgagctag cgctaaccgg tggcgcgtta
961agtcgacaat caacctctgg atta

Download FASTA (ORF) (Full)