Construct: ORF ccsbBroadEn_00315

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009236.1_s300c1, BRDN0000389173
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CKMT2 (1160)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1160 CKMT2 creatine kinase, mitochondr... NM_001099735.2 100% 100%
2 human 1160 CKMT2 creatine kinase, mitochondr... NM_001099736.1 100% 100%
3 human 1160 CKMT2 creatine kinase, mitochondr... NM_001825.2 100% 100%
4 human 1160 CKMT2 creatine kinase, mitochondr... XM_024454356.1 78.1% 78.1% 1_351del
5 mouse 76722 Ckmt2 creatine kinase, mitochondr... NM_198415.2 88.8% 95.9% (many diffs)
6 mouse 76722 Ckmt2 creatine kinase, mitochondr... XM_006517454.3 46.4% 49.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1323
ORF length:
1257
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CAGTATCTTT TCTAAGTTGC TAACTGGCCG CAATGCTTCT CTGCTGTTTG
121CTACCATGGG CACCAGTGTC CTGACCACCG GGTACCTGCT GAACCGGCAG AAAGTGTGTG
181CCGAGGTCCG GGAGCAGCCT AGGCTATTTC CTCCAAGCGC AGACTACCCA GACCTGCGCA
241AGCACAACAA CTGCATGGCC GAGTGCCTCA CCCCCGCCAT TTATGCCAAG CTTCGCAACA
301AGGTGACACC CAACGGCTAC ACGCTGGACC AGTGCATCCA GACTGGAGTG GACAACCCTG
361GCCACCCCTT CATAAAGACT GTGGGCATGG TGGCTGGTGA CGAGGAGTCC TATGAGGTGT
421TTGCTGACCT TTTTGACCCC GTCATCAAAC TAAGACACAA CGGCTATGAC CCCAGGGTGA
481TGAAGCACAC AACGGATCTG GATGCATCAA AGATCACCCA AGGGCAGTTC GACGAGCATT
541ACGTGCTGTC TTCTCGGGTG CGCACTGGCC GCAGCATCCG TGGGCTGAGC CTGCCTCCAG
601CCTGCACCCG GGCCGAGCGA AGGGAGGTAG AGAACGTGGC CATCACTGCC CTGGAGGGCC
661TCAAGGGGGA CCTGGCTGGC CGCTACTACA AGCTGTCCGA GATGACGGAG CAGGACCAGC
721AGCGGCTCAT CGATGACCAC TTTCTGTTTG ATAAGCCAGT GTCCCCTTTA TTAACATGTG
781CTGGGATGGC CCGTGACTGG CCAGATGCCA GGGGAATCTG GCATAATTAT GATAAGACAT
841TTCTCATCTG GATAAATGAG GAGGATCACA CCAGGGTAAT CTCAATGGAA AAAGGAGGCA
901ATATGAAACG AGTATTTGAG CGATTCTGTC GTGGACTAAA AGAAGTAGAA CGGTTAATCC
961AAGAACGAGG CTGGGAGTTC ATGTGGAATG AGCGCCTAGG ATACATTTTG ACCTGTCCTT
1021CGAACCTTGG AACAGGACTA CGAGCTGGTG TCCACGTTAG GATCCCAAAG CTCAGCAAGG
1081ACCCACGCTT TTCTAAGATC CTGGAAAACC TAAGACTCCA GAAGCGTGGC ACAGGTGGTG
1141TGGACACTGC CGCGGTCGCA GATGTGTACG ACATTTCCAA CATAGATAGA ATTGGTCGAT
1201CAGAGGTTGA GCTTGTTCAG ATAGTCATCG ATGGAGTCAA TTACCTGGTG GATTGTGAAA
1261AGAAGTTGGA GAGAGGCCAA GATATTAAGG TGCCACCCCC TCTGCCTCAG TTTGGCAAAA
1321AGTACCCAAC TTTATTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1381gcaacgaac

Download FASTA (ORF) (Full)