Construct: ORF ccsbBroadEn_00441

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012814.1_s300c1, BRDN0000393575
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DGUOK (1716)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1716 DGUOK deoxyguanosine kinase NM_080916.3 100% 100%
2 human 1716 DGUOK deoxyguanosine kinase XM_011532647.2 97.8% 97.8% 423_424insAGGTCTGTGTACAGTGAC
3 human 1716 DGUOK deoxyguanosine kinase NM_080918.3 68.2% 68.2% 443_444ins264
4 human 1716 DGUOK deoxyguanosine kinase NM_001318859.2 66% 66% 425_426ins282
5 human 1716 DGUOK deoxyguanosine kinase NM_001318860.2 64.9% 64.9% 0_1ins291
6 human 1716 DGUOK deoxyguanosine kinase NM_001318861.2 64.9% 64.9% 0_1ins291
7 human 1716 DGUOK deoxyguanosine kinase XM_024452739.1 64.9% 64.9% 0_1ins291
8 human 1716 DGUOK deoxyguanosine kinase NM_001318862.2 62.8% 62.8% 0_1ins291;132_133insAGGTCTGTGTACAGTGAC
9 human 1716 DGUOK deoxyguanosine kinase NM_001318863.2 62.8% 62.8% 0_1ins291;132_133insAGGTCTGTGTACAGTGAC
10 human 1716 DGUOK deoxyguanosine kinase XR_244926.3 62.6% 1_83del;674_675ins116;799_1026del
11 human 1716 DGUOK deoxyguanosine kinase XR_001738656.1 59.7% 1_84del;524_525ins148;768_995del
12 human 1716 DGUOK deoxyguanosine kinase NR_134897.2 56.9% (many diffs)
13 human 1716 DGUOK deoxyguanosine kinase NR_134894.2 56% (many diffs)
14 human 1716 DGUOK deoxyguanosine kinase NR_134898.2 53% (many diffs)
15 human 1716 DGUOK deoxyguanosine kinase NR_134893.2 42.2% (many diffs)
16 human 1716 DGUOK deoxyguanosine kinase NR_134896.2 40.5% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
897
ORF length:
831
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC CGCGGGCCGC CTCTTTCTAA GTCGGCTTCG AGCACCCTTC AGTTCCATGG
121CCAAGAGCCC ACTCGAGGGC GTTTCCTCCT CCAGAGGCCT GCACGCGGGG CGCGGGCCCC
181GAAGGCTCTC CATCGAAGGC AACATTGCTG TGGGAAAGTC CACGTTTGTG AAGTTACTCA
241CGAAAACTTA CCCAGAATGG CACGTAGCTA CAGAACCTGT AGCAACATGG CAGAATATCC
301AGGCTGCTGG CACCCAAAAA GCCTGCACTG CCCAAAGTCT TGGAAACTTG CTGGATATGA
361TGTACCGGGA GCCAGCACGA TGGTCCTACA CATTCCAGAC ATTTTCCTTT TTGAGCCGCC
421TGAAAGTACA GCTGGAGCCC TTCCCTGAGA AACTCTTACA GGCCAGGAAG CCAGTACAGA
481TCTTTGAGAG GTCTGTGTAC AGTGACAGGT ATATCTTTGC AAAGAATCTT TTTGAAAATG
541GTTCCCTCAG TGACATCGAG TGGCATATCT ATCAGGACTG GCATTCTTTT CTCCTGTGGG
601AGTTTGCCAG CCGGATCACA TTACATGGCT TCATCTACCT CCAGGCTTCT CCCCAGGTTT
661GTTTGAAGAG ACTGTACCAG AGGGCCAGGG AGGAGGAGAA AGGAATTGAG CTGGCCTATC
721TAGAGCAGCT GCATGGCCAA CACGAAGCCT GGCTTATTCA CAAGACAACG AAGCTCCACT
781TTGAGGCTCT GATGAACATT CCAGTGCTGG TGTTGGATGT CAATGATGAT TTTTCTGAGG
841AAGTAACCAA ACAAGAAGAC CTCATGAGAG AGGTAAACAC CTTTGTAAAG AATCTGTACC
901CAACTTTCTT GTACAAAGTt ggcattataa gaaagcattg cttatcaatt tgttgcaacg
961aac

Download FASTA (ORF) (Full)