Construct: ORF ccsbBroadEn_01682

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002079.1_s300c1, BRDN0000386258
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GPR137B (7107)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7107 GPR137B G protein-coupled receptor ... NM_003272.4 100% 100%
2 human 7107 GPR137B G protein-coupled receptor ... XM_017002209.2 93.2% 91.9% (many diffs)
3 human 7107 GPR137B G protein-coupled receptor ... XM_017002210.2 89.2% 89.2% 837_838ins129
4 human 7107 GPR137B G protein-coupled receptor ... XR_247039.4 17.5% 1_94del;1186_1333del;1440_6819del
5 mouse 83924 Gpr137b G protein-coupled receptor ... NM_031999.2 86.6% 91.2% (many diffs)
6 mouse 83924 Gpr137b G protein-coupled receptor ... XM_006516805.3 80.2% 82% (many diffs)
7 mouse 664862 Gpr137b-ps G protein-coupled receptor ... NR_003568.1 36% (many diffs)
8 mouse 83924 Gpr137b G protein-coupled receptor ... XR_382078.1 27.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1263
ORF length:
1197
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG GCCCGAGCGT CCCCGGCCGC GCGGCAGCGC CCCCGGCCCG ATGGAGACCC
121CGCCGTGGGA CCCAGCCCGC AACGACTCGC TGCCGCCCAC GCTGACCCCG GCCGTGCCCC
181CCTACGTGAA GCTTGGCCTC ACCGTCGTCT ACACCGTGTT CTACGCGCTG CTCTTCGTGT
241TCATCTACGT GCAGCTCTGG CTGGTGCTGC GTTACCGCCA CAAGCGGCTC AGCTACCAGA
301GCGTCTTCCT CTTTCTCTGC CTCTTCTGGG CCTCCCTGCG GACCGTCCTC TTCTCCTTCT
361ACTTCAAAGA CTTCGTGGCG GCCAATTCGC TCAGCCCCTT CGTCTTCTGG CTGCTCTACT
421GCTTCCCTGT GTGCCTGCAG TTTTTCACCC TCACGCTGAT GAACTTGTAC TTCACGCAGG
481TGATTTTCAA AGCCAAGTCA AAATATTCTC CAGAATTACT CAAATACCGG TTGCCCCTCT
541ACCTGGCCTC CCTCTTCATC AGCCTTGTTT TCCTGTTGGT GAATTTAACC TGTGCTGTGC
601TGGTAAAGAC GGGAAATTGG GAGAGGAAGG TTATCGTCTC TGTGCGAGTG GCCATTAATG
661ACACGCTCTT CGTGCTGTGT GCCGTCTCTC TCTCCATCTG TCTCTACAAA ATCTCTAAGA
721TGTCCTTAGC CAACATTTAC TTGGAGTCCA AGGGCTCCTC CGTGTGTCAA GTGACTGCCA
781TCGGTGTCAC CGTGATACTG CTTTACACCT CTCGGGCCTG CTACAACCTG TTCATCCTGT
841CATTTTCTCA GAACAAGAGC GTCCATTCCT TTGATTATGA CTGGTACAAT GTATCAGACC
901AGGCAGATTT GAAGAATCAG CTGGGAGATG CTGGATACGT ATTATTTGGA GTGGTGTTAT
961TTGTTTGGGA ACTCTTACCT ACCACCTTAG TCGTTTATTT CTTCCGAGTT AGAAATCCTA
1021CAAAGGACCT TACCAACCCT GGAATGGTCC CCAGCCATGG ATTCAGTCCC AGATCTTATT
1081TCTTTGACAA CCCTCGAAGA TATGACAGTG ATGATGACCT TGCCTGGAAC ATTGCCCCTC
1141AGGGACTTCA GGGAGGTTTT GCTCCAGATT ACTATGATTG GGGACAACAA ACTAACAGCT
1201TCCTGGCACA AGCAGGAACT TTGCAAGACT CAACTTTGGA TCCTGACAAA CCAAGCCTTG
1261GGTACCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
1321gcaacgaac

Download FASTA (ORF) (Full)