Construct: ORF ccsbBroadEn_01930

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017764.1_s300c1, BRDN0000396878
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CUL2 (8453)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8453 CUL2 cullin 2 NM_001198777.2 100% 100%
2 human 8453 CUL2 cullin 2 NM_003591.4 100% 100%
3 human 8453 CUL2 cullin 2 XM_011519747.1 100% 100%
4 human 8453 CUL2 cullin 2 NM_001198779.1 98.2% 98.2% 1_39del
5 human 8453 CUL2 cullin 2 NM_001198778.2 97.5% 97.5% 1_57del
6 human 8453 CUL2 cullin 2 XM_011519743.1 92.2% 92.2% 1_189del
7 human 8453 CUL2 cullin 2 XM_011519744.1 92.2% 92.2% 1_189del
8 human 8453 CUL2 cullin 2 XM_011519745.1 92.2% 92.2% 1_189del
9 human 8453 CUL2 cullin 2 NM_001324375.2 91.5% 91.4% 317_318ins189
10 human 8453 CUL2 cullin 2 NM_001324376.2 82.4% 82.4% 0_1ins393
11 mouse 71745 Cul2 cullin 2 NM_029402.3 91.3% 97.3% (many diffs)
12 mouse 71745 Cul2 cullin 2 XM_006526274.3 91.3% 97.3% (many diffs)
13 mouse 71745 Cul2 cullin 2 XM_006526275.3 91.3% 97.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2301
ORF length:
2235
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC TTTGAAACCA AGAGTAGTAG ATTTTGATGA AACATGGAAC AAACTTTTGA
121CGACAATAAA AGCCGTGGTC ATGTTGGAAT ACGTCGAAAG AGCAACATGG AATGACCGTT
181TCTCAGATAT CTATGCTTTA TGTGTGGCCT ATCCTGAACC CCTTGGAGAA AGACTTTATA
241CAGAAACTAA GATTTTTTTG GAAAATCATG TTCGGCATTT GCATAAGAGA GTTTTGGAGT
301CAGAAGAACA AGTACTTGTT ATGTATCATA GGTACTGGGA AGAATACAGC AAGGGTGCAG
361ACTATATGGA CTGCTTATAT AGGTATCTCA ACACCCAGTT TATTAAAAAG AATAAATTAA
421CAGAAGCGGA CCTTCAGTAT GGCTATGGTG GTGTAGATAT GAATGAACCA CTTATGGAAA
481TAGGAGAGCT AGCATTGGAT ATGTGGAGGA AATTGATGGT TGAACCACTT CAGGCCATCC
541TTATCCGAAT GCTGCTCCGA GAAATCAAAA ATGATCGTGG TGGAGAAGAC CCAAACCAGA
601AAGTAATCCA TGGGGTTATT AACTCCTTTG TTCATGTTGA ACAGTATAAG AAAAAATTCC
661CCTTAAAGTT TTATCAGGAA ATTTTTGAGT CTCCCTTTCT GACTGAAACA GGAGAGTATT
721ACAAACAAGA AGCTTCAAAT TTATTACAAG AATCAAACTG CTCACAGTAT ATGGAAAAGG
781TTCTAGGTAG ATTAAAAGAT GAAGAAATTC GATGTCGAAA ATACCTACAT CCAAGTTCAT
841ATACTAAGGT GATTCATGAA TGTCAACAAC GAATGGTAGC AGACCACTTA CAGTTTTTAC
901ATGCAGAATG TCATAATATA ATTCGACAAG AGAAAAAAAA TGACATGGCA AATATGTACG
961TCTTACTCCG TGCTGTGTCC ACTGGTTTAC CTCATATGAT TCAGGAGCTG CAAAACCACA
1021TCCATGATGA GGGCCTTCGA GCAACCAGCA ACCTTACTCA GGAAAACATG CCAACACTAT
1081TTGTGGAGTC AGTTTTGGAA GTGCATGGTA AATTTGTTCA GCTTATCAAC ACTGTTTTGA
1141ATGGTGATCA GCATTTTATG AGTGCGTTGG ATAAGGCCCT TACGTCAGTT GTAAATTACA
1201GAGAACCTAA GTCTGTTTGC AAAGCACCTG AACTGCTTGC TAAGTACTGT GACAACTTAC
1261TGAAGAAGTC AGCGAAAGGG ATGACAGAGA ATGAAGTGGA AGACAGGCTC ACGAGCTTCA
1321TCACAGTGTT CAAATACATT GATGACAAGG ACGTCTTTCA AAAGTTCTAC GCAAGAATGC
1381TGGCAAAACG TTTAATTCAT GGGTTATCCA TGTCTATGGA CTCTGAAGAA GCCATGATCA
1441ACAAATTAAA GCAAGCCTGT GGTTATGAGT TTACCAGCAA GCTACATCGG ATGTATACAG
1501ATATGAGTGT CAGCGCTGAT CTCAACAATA AGTTCAACAA TTTTATCAAA AACCAAGACA
1561CAGTAATAGA TTTGGGAATT AGTTTTCAAA TATATGTTCT ACAGGCTGGT GCGTGGCCTC
1621TTACTCAGGC TCCTTCATCT ACGTTTGCAA TTCCCCAGGA ATTAGAAAAA AGTGTACAGA
1681TGTTTGAATT ATTTTATAGC CAACATTTCA GTGGAAGGAA ACTTACATGG TTACATTATC
1741TGTGTACAGG TGAAGTTAAA ATGAACTATT TGGGCAAACC ATATGTAGCC ATGGTTACAA
1801CATACCAAAT GGCAGTTCTT CTTGCCTTTA ACAACAGTGA AACTGTCAGT TATAAAGAGC
1861TTCAGGACAG CACTCAGATG AATGAAAAGG AACTGACAAA AACAATCAAA TCATTACTTG
1921ATGTGAAAAT GATTAACCAT GATTCAGAAA AGGAAGATAT TGATGCAGAA TCTTCGTTTT
1981CATTAAATAT GAACTTTAGC AGTAAAAGAA CAAAATTTAA AATTACTACA TCAATGCAGA
2041AAGACACACC ACAAGAAATG GAGCAGACTA GAAGTGCAGT TGATGAGGAC CGGAAAATGT
2101ATCTCCAAGC TGCTATAGTT CGTATCATGA AAGCACGAAA AGTGCTTCGG CACAATGCCC
2161TTATTCAAGA GGTGATTAGC CAGTCAAGAG CTAGGTTTAA TCCCAGTATC AGCATGATTA
2221AGAAGTGTAT TGAAGTTCTG ATAGACAAAC AATACATAGA ACGCAGCCAG GCGTCGGCAG
2281ATGAATACAG CTACGTCGCG TGCCCAACTT TCTTGTACAA AGTtggcatt ataagaaagc
2341attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)