Construct: ORF ccsbBroadEn_02214

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000650.1_s300c1, BRDN0000387831
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RGS6 (9628)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9628 RGS6 regulator of G protein sign... NM_001370287.1 100% 100%
2 human 9628 RGS6 regulator of G protein sign... NM_001370288.1 100% 100%
3 human 9628 RGS6 regulator of G protein sign... NM_001370289.1 100% 100%
4 human 9628 RGS6 regulator of G protein sign... NM_004296.7 100% 100%
5 human 9628 RGS6 regulator of G protein sign... XM_017021828.2 97.4% 97% (many diffs)
6 human 9628 RGS6 regulator of G protein sign... NM_001370290.1 97.3% 96.2% (many diffs)
7 human 9628 RGS6 regulator of G protein sign... NM_001370291.1 97.3% 96.2% (many diffs)
8 human 9628 RGS6 regulator of G protein sign... XM_017021830.2 97.3% 96.2% (many diffs)
9 human 9628 RGS6 regulator of G protein sign... XM_017021825.2 97% 96.6% (many diffs)
10 human 9628 RGS6 regulator of G protein sign... XM_017021826.2 96.9% 96.8% (many diffs)
11 human 9628 RGS6 regulator of G protein sign... XM_017021832.2 96.8% 96.8% (many diffs)
12 human 9628 RGS6 regulator of G protein sign... XM_017021827.2 96.7% 96.8% (many diffs)
13 human 9628 RGS6 regulator of G protein sign... NM_001204418.3 96.7% 96.6% (many diffs)
14 human 9628 RGS6 regulator of G protein sign... XM_024449774.1 96.7% 96.6% (many diffs)
15 human 9628 RGS6 regulator of G protein sign... NM_001204416.3 96.3% 96.3% 1368_1421del
16 human 9628 RGS6 regulator of G protein sign... NM_001204424.2 96.3% 96.3% 1368_1421del
17 human 9628 RGS6 regulator of G protein sign... NM_001370284.1 96.3% 96.3% 1368_1421del
18 human 9628 RGS6 regulator of G protein sign... NM_001204417.3 95.8% 94.8% (many diffs)
19 human 9628 RGS6 regulator of G protein sign... XM_024449770.1 95.8% 94.8% (many diffs)
20 human 9628 RGS6 regulator of G protein sign... XM_017021831.2 93.5% 90.3% (many diffs)
21 human 9628 RGS6 regulator of G protein sign... NM_001204423.2 92.5% 92.5% 0_1ins105
22 human 9628 RGS6 regulator of G protein sign... NM_001204420.3 92.1% 92.1% 852_853ins111
23 human 9628 RGS6 regulator of G protein sign... NM_001370292.1 92.1% 92.1% 852_853ins111
24 human 9628 RGS6 regulator of G protein sign... NM_001370293.1 92.1% 92.1% 852_853ins111
25 human 9628 RGS6 regulator of G protein sign... NM_001370282.1 89.2% 88.3% (many diffs)
26 human 9628 RGS6 regulator of G protein sign... XM_017021822.2 89% 88.1% (many diffs)
27 human 9628 RGS6 regulator of G protein sign... NM_001204422.3 88.9% 88.8% (many diffs)
28 human 9628 RGS6 regulator of G protein sign... NM_001204419.3 88.7% 88.7% 852_853ins111;1257_1310del
29 human 9628 RGS6 regulator of G protein sign... XM_024449776.1 88.7% 88.7% 852_853ins111;1257_1310del
30 human 9628 RGS6 regulator of G protein sign... NM_001204421.3 88.2% 87.2% (many diffs)
31 human 9628 RGS6 regulator of G protein sign... NM_001370281.1 87.4% 86.4% (many diffs)
32 human 9628 RGS6 regulator of G protein sign... NM_001370270.1 85.3% 83.2% 1368_1488del;1538_1659del
33 human 9628 RGS6 regulator of G protein sign... NM_001370271.1 85.3% 83.2% 1368_1488del;1538_1659del
34 human 9628 RGS6 regulator of G protein sign... NM_001370272.1 85.3% 83.2% 1368_1488del;1538_1659del
35 human 9628 RGS6 regulator of G protein sign... NM_001370273.1 85.3% 83.2% 1368_1488del;1538_1659del
36 human 9628 RGS6 regulator of G protein sign... NM_001370274.1 85.3% 83.2% 1368_1488del;1538_1659del
37 human 9628 RGS6 regulator of G protein sign... NM_001370279.1 84.8% 82.6% 679_680insAAAAGGTTA;1359_1479del;1529_1650del
38 human 9628 RGS6 regulator of G protein sign... NM_001370294.1 83.2% 83.2% 852_853ins237
39 human 9628 RGS6 regulator of G protein sign... NM_001370278.1 81.2% 79.2% 1364_1568del;1622_1743del
40 human 9628 RGS6 regulator of G protein sign... NM_001370283.1 78.6% 76.5% 852_853ins111;1257_1377del;1427_1548del
41 human 9628 RGS6 regulator of G protein sign... XM_024449768.1 78.6% 76.5% 852_853ins111;1257_1377del;1427_1548del
42 human 9628 RGS6 regulator of G protein sign... XM_017021833.2 78.3% 78.1% (many diffs)
43 human 9628 RGS6 regulator of G protein sign... NM_001370277.1 76.8% 75.9% (many diffs)
44 human 9628 RGS6 regulator of G protein sign... NM_001370280.1 74% 71.9% 963_964ins126;1238_1442del;1496_1617del
45 human 9628 RGS6 regulator of G protein sign... NM_001370286.1 72.6% 70.5% (many diffs)
46 human 9628 RGS6 regulator of G protein sign... NM_001370275.1 71.9% 70.1% 1368_1488del;1538_1968del
47 human 9628 RGS6 regulator of G protein sign... NM_001370276.1 71.9% 70.1% 1368_1488del;1538_1968del
48 human 9628 RGS6 regulator of G protein sign... XM_024449759.1 69% 67.2% 1364_1568del;1622_2052del
49 human 9628 RGS6 regulator of G protein sign... XM_024449760.1 69% 67.2% 1364_1568del;1622_2052del
50 human 9628 RGS6 regulator of G protein sign... XM_024449761.1 69% 67.2% 1364_1568del;1622_2052del
51 human 9628 RGS6 regulator of G protein sign... XM_017021834.1 67.3% 66.2% (many diffs)
52 human 9628 RGS6 regulator of G protein sign... XM_017021820.2 63.5% 61.8% 852_853ins111;1253_1457del;1511_1941del
53 human 9628 RGS6 regulator of G protein sign... XM_024449763.1 58.9% 57.2% 0_1ins207;1157_1361del;1415_1845del
54 human 9628 RGS6 regulator of G protein sign... XM_024449764.1 58.9% 57.2% 0_1ins207;1157_1361del;1415_1845del
55 human 9628 RGS6 regulator of G protein sign... XM_011537393.2 50.2% 47.8% (many diffs)
56 human 9628 RGS6 regulator of G protein sign... XM_011537397.1 48.6% 47% 0_1ins417;947_1151del;1205_1635del
57 human 9628 RGS6 regulator of G protein sign... XM_011537407.2 37.7% 36% 0_1ins642;722_926del;980_1410del
58 human 9628 RGS6 regulator of G protein sign... NR_135235.2 24.8% 1_101del;1469_1585del;1635_5700del
59 human 9628 RGS6 regulator of G protein sign... XR_002957573.1 24% 1_523del;1940_5876del
60 human 9628 RGS6 regulator of G protein sign... XR_001750613.2 23.6% 1_523del;1891_2007del;2057_5993del
61 mouse 50779 Rgs6 regulator of G-protein sign... NM_001282061.2 92% 97.6% (many diffs)
62 mouse 50779 Rgs6 regulator of G-protein sign... NM_015812.4 92% 97.6% (many diffs)
63 mouse 50779 Rgs6 regulator of G-protein sign... NM_001310478.2 88.6% 94% (many diffs)
64 mouse 50779 Rgs6 regulator of G-protein sign... XM_011244133.2 78.6% 81.3% (many diffs)
65 mouse 50779 Rgs6 regulator of G-protein sign... XM_011244134.2 78.6% 81.3% (many diffs)
66 mouse 50779 Rgs6 regulator of G-protein sign... XM_011244135.2 78.6% 81.3% (many diffs)
67 mouse 50779 Rgs6 regulator of G-protein sign... XM_011244136.2 78.6% 81.3% (many diffs)
68 mouse 50779 Rgs6 regulator of G-protein sign... XM_011244137.2 78.6% 81.3% (many diffs)
69 mouse 50779 Rgs6 regulator of G-protein sign... XM_006516070.3 69.2% 66.1% (many diffs)
70 mouse 50779 Rgs6 regulator of G-protein sign... XM_011244138.2 67% 69% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1485
ORF length:
1416
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGCTCAAGGA TCCGGGGATC AAAGAGCAGT GGGGGTTGCT GACCCAGAGG
121AGAGTTCTCC AAACATGATC GTTTACTGCA AAATTGAAGA CATCATTACA AAGATGCAAG
181ATGACAAGAC AGGGGGTGTG CCCATCAGAA CAGTCAAGAG CTTTCTCTCC AAAATCCCCA
241GTGTCGTCAC AGGTACTGAC ATTGTGCAGT GGCTTATGAA GAACCTTTCC ATTGAGGACC
301CAGTTGAAGC AATACACTTG GGGAGCCTTA TCGCTGCCCA GGGCTACATC TTTCCAATCT
361CAGACCATGT TCTCACCATG AAGGATGATG GCACCTTTTA TCGTTTCCAG GCTCCGTACT
421TCTGGCCTTC GAACTGCTGG GAACCTGAAA ACACTGACTA TGCCATCTAT CTCTGTAAGA
481GGACAATGCA AAATAAAGCA AGGCTGGAAC TGGCAGATTA TGAAGCAGAA AACTTAGCAA
541GACTCCAGAG GGCCTTTGCG AGGAAGTGGG AATTCATCTT TATGCAAGCA GAAGCACAAG
601TAAAGATTGA CCGGAAAAAA GACAAGACAG AAAGGAAAAT TTTGGATAGT CAAGAACGAG
661CCTTTTGGGA TGTCCACAGG CCTGTGCCAG GCTGTGTGAA CACAACAGAA ATGGATATCC
721GAAAATGTCG ACGTTTGAAG AATCCACAAA AGGTTAAAAA GTCCGTGTAT GGCGTGACTG
781AAGAGTCCCA GGCACAGAGC CCGGTGCATG TACTCAGCCA ACCAATCAGG AAAACAACAA
841AAGAGGACAT CCGGAAACAG ATAACATTTT TGAACGCACA GATCGACAGA CATTGTTTGA
901AAATGTCCAA AGTGGCTGAA AGTTTAATTG CCTACACGGA ACAATATGTG GAATATGACC
961CTTTGATAAC ACCAGCTGAG CCATCCAACC CTTGGATCAG CGATGACGTT GCTTTGTGGG
1021ACATAGAGAT GAGCAAAGAG CCCAGCCAAC AGCGAGTAAA AAGATGGGGC TTCTCTTTCG
1081ATGAGATATT GAAGGACCAG GTGGGGCGGG ACCAGTTTCT ACGATTCCTG GAGTCCGAAT
1141TCAGTTCAGA AAACCTCAGG TTCTGGCTGG CTGTCCAAGA TCTTAAGAAA CAACCCCTAC
1201AGGATGTGGC CAAGAGGGTA GAAGAAATCT GGCAAGAGTT TCTGGCTCCA GGGGCTCCAA
1261GTGCAATCAA CCTGGATTCT CACAGCTATG AGATAACCAG TCAAAATGTC AAAGATGGAG
1321GGAGATATAC ATTTGAAGAC GCCCAGGAGC ACATCTACAA GCTGATGAAG AGTGACAGCT
1381ATGCCCGCTT CCTCCGGTCA AATGCTTACC AGGATTTGCT GCTGGCCAAG AAGAAGGGAA
1441AGTCGCTGGC GGGCAAGCGC CTCACGGGCC TGATGCAGTC CTCCTTGCCA ACTTTCTTGT
1501ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)