Construct: ORF ccsbBroadEn_02766

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014202.1_s300c1, BRDN0000386499
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GPR161 (23432)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23432 GPR161 G protein-coupled receptor 161 NM_001267610.1 100% 100%
2 human 23432 GPR161 G protein-coupled receptor 161 NM_001349632.1 100% 100%
3 human 23432 GPR161 G protein-coupled receptor 161 NM_001349633.1 100% 100%
4 human 23432 GPR161 G protein-coupled receptor 161 NM_001349634.1 100% 100%
5 human 23432 GPR161 G protein-coupled receptor 161 NM_153832.2 100% 100%
6 human 23432 GPR161 G protein-coupled receptor 161 XM_005245056.2 100% 100%
7 human 23432 GPR161 G protein-coupled receptor 161 XM_005245057.4 100% 100%
8 human 23432 GPR161 G protein-coupled receptor 161 XM_011509376.2 100% 100%
9 human 23432 GPR161 G protein-coupled receptor 161 XM_011509378.1 100% 100%
10 human 23432 GPR161 G protein-coupled receptor 161 NM_001267611.1 96.8% 96.8% 1_51del
11 human 23432 GPR161 G protein-coupled receptor 161 NM_001267609.1 96.3% 96.3% 1_60del
12 human 23432 GPR161 G protein-coupled receptor 161 XM_005245055.2 96.3% 96.3% 1_60del
13 human 23432 GPR161 G protein-coupled receptor 161 XM_006711251.1 95.8% 95.8% 1_69del
14 human 23432 GPR161 G protein-coupled receptor 161 XM_011509371.2 95.8% 95.8% 1_69del
15 human 23432 GPR161 G protein-coupled receptor 161 XM_011509372.1 95.8% 95.8% 1_69del
16 human 23432 GPR161 G protein-coupled receptor 161 XM_011509373.2 95.8% 95.8% 1_69del
17 human 23432 GPR161 G protein-coupled receptor 161 XM_006711253.2 86.8% 86.8% 1_240del
18 human 23432 GPR161 G protein-coupled receptor 161 NM_001267613.1 81.5% 72% (many diffs)
19 human 23432 GPR161 G protein-coupled receptor 161 NM_001267614.1 77.7% 76.9% (many diffs)
20 human 23432 GPR161 G protein-coupled receptor 161 NM_001267612.1 75% 75% 0_1ins396
21 human 23432 GPR161 G protein-coupled receptor 161 NM_001349635.1 75% 75% 0_1ins396
22 mouse 240888 Gpr161 G protein-coupled receptor 161 NM_001310430.1 87.9% 92.8% (many diffs)
23 mouse 240888 Gpr161 G protein-coupled receptor 161 XM_006496850.3 87.9% 92.8% (many diffs)
24 mouse 240888 Gpr161 G protein-coupled receptor 161 XM_006496851.3 87.9% 92.8% (many diffs)
25 mouse 240888 Gpr161 G protein-coupled receptor 161 XM_006496852.3 87.9% 92.8% (many diffs)
26 mouse 240888 Gpr161 G protein-coupled receptor 161 XM_011238821.2 87.9% 92.8% (many diffs)
27 mouse 240888 Gpr161 G protein-coupled receptor 161 NM_001310429.1 85.2% 89.9% (many diffs)
28 mouse 240888 Gpr161 G protein-coupled receptor 161 NM_001081126.2 83.2% 87.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1653
ORF length:
1587
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG CCTCAACTCC TCCCTCAGCT GCAGGAAGGA GCTGAGTAAT CTCACTGAGG
121AGGAGGGTGG CGAAGGGGGC GTCATCATCA CCCAGTTCAT CGCCATCATT GTCATCACCA
181TTTTTGTCTG CCTGGGAAAC CTGGTCATCG TGGTCACCTT GTACAAGAAG TCCTACCTCC
241TCACCCTCAG CAACAAGTTC GTCTTCAGCC TGACTCTGTC CAACTTCCTG CTGTCCGTGT
301TGGTGCTGCC TTTTGTGGTG ACGAGCTCCA TCCGCAGGGA ATGGATCTTT GGTGTAGTGT
361GGTGCAACTT CTCTGCCCTC CTCTACCTGC TGATCAGCTC TGCCAGCATG CTAACCCTCG
421GGGTCATTGC CATCGACCGC TACTATGCTG TCCTGTACCC CATGGTGTAC CCCATGAAGA
481TCACAGGGAA CCGGGCTGTG ATGGCACTTG TCTACATCTG GCTTCACTCG CTCATCGGCT
541GCCTGCCACC CCTGTTTGGT TGGTCATCCG TGGAGTTTGA CGAGTTCAAA TGGATGTGTG
601TGGCTGCTTG GCACCGGGAG CCTGGCTACA CGGCCTTCTG GCAGATCTGG TGTGCCCTCT
661TCCCCTTTCT GGTCATGCTG GTGTGCTATG GCTTCATCTT CCGCGTGGCC AGGGTCAAGG
721CACGCAAGGT GCACTGTGGC ACAGTCGTCA TCGTGGAGGA GGATGCTCAG AGGACCGGGA
781GGAAGAACTC CAGCACCTCC ACCTCCTCTT CAGGCAGCAG GAGGAATGCC TTTCAGGGTG
841TGGTCTACTC GGCCAACCAG TGCAAAGCCC TCATCACCAT CCTGGTGGTC CTCGGTGCCT
901TCATGGTCAC CTGGGGCCCC TACATGGTTG TCATCGCCTC TGAGGCCCTC TGGGGGAAAA
961GCTCCGTCTC CCCGAGCCTG GAGACTTGGG CCACATGGCT GTCCTTTGCC AGCGCTGTCT
1021GCCACCCCCT GATCTATGGA CTCTGGAACA AGACAGTTCG CAAAGAACTA CTGGGCATGT
1081GCTTTGGGGA CCGGTATTAT CGGGAACCAT TTGTGCAACG ACAGAGGACT TCCAGGCTCT
1141TCAGCATTTC CAACAGGATC ACAGACCTGG GCCTGTCCCC ACACCTCACT GCGCTCATGG
1201CAGGTGGACA GCCCCTGGGG CACAGCAGCA GCACGGGGGA CACTGGCTTC AGCTGCTCCC
1261AGGACTCAGG GACAGATATG ATGCTGCTTG AGGACTACAC GTCTGATGAC AACCCTCCCT
1321CTCACTGCAC TTGCCCACCC AAGAGAAGGA GCTCGGTGAC ATTTGAGGAT GAAGTGGAAC
1381AAATCAAAGA AGCTGCCAAG AACTCGATTC TTCATGTGAA AGCTGAAGTA CACAAGTCCT
1441TGGACAGTTA CGCAGCAAGC TTGGCCAAAG CCATTGAGGC CGAAGCCAAA ATCAACTTAT
1501TTGGGGAGGA GGCTTTGCCA GGGGTCTTGG TTACAGCACG GACTGTCCCG GGGGGCGGCT
1561TCGGGGGCCG CCGAGGCAGC AGAACTCTTG TGAGCCAGAG GCTGCAGTTG CAGAGCATCG
1621AAGAAGGAGA TGTTTTAGCT GCCGAGCAGA GATGCCCAAC TTTCTTGTAC AAAGTtggca
1681ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)