Construct: ORF ccsbBroadEn_05159

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF006406.1_s300c1, BRDN0000394436
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADAMTS15 (170689)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 170689 ADAMTS15 ADAM metallopeptidase with ... NM_139055.3 100% 100%
2 human 170689 ADAMTS15 ADAM metallopeptidase with ... XM_005271419.4 65.1% 65.1% 0_1ins993
3 human 170689 ADAMTS15 ADAM metallopeptidase with ... XR_001747783.1 46.7% 1_98del;2949_6090del
4 mouse 235130 Adamts15 a disintegrin-like and meta... NM_001024139.1 87.9% 93% (many diffs)
5 mouse 235130 Adamts15 a disintegrin-like and meta... NM_001329420.1 57.1% 61.2% (many diffs)
6 mouse 235130 Adamts15 a disintegrin-like and meta... XM_006510213.1 57.1% 61.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2919
ORF length:
2850
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCTTCTGCTG GGCATCCTAA CCCTGGCTTT CGCCGGGCGA ACCGCTGGAG
121GCTCTGAGCC AGAGCGGGAG GTAGTCGTTC CCATCCGACT GGACCCGGAC ATTAACGGCC
181GCCGCTACTA CTGGCGGGGT CCCGAGGACT CCGGGGATCA GGGACTCATT TTTCAGATCA
241CAGCATTTCA GGAGGACTTT TACCTACACC TGACGCCGGA TGCTCAGTTC TTGGCTCCCG
301CCTTCTCCAC TGAGCATCTG GGCGTCCCCC TCCAGGGGCT CACCGGGGGC TCTTCAGACC
361TGCGACGCTG CTTCTATTCT GGGGACGTGA ACGCCGAGCC GGACTCGTTC GCTGCTGTGA
421GCCTGTGCGG GGGGCTCCGC GGAGCCTTTG GCTACCGAGG CGCCGAGTAT GTCATTAGCC
481CGCTGCCCAA TGCTAGCGCG CCGGCGGCGC AGCGCAACAG CCAGGGCGCA CACCTTCTCC
541AGCGCCGGGG TGTTCCGGGC GGGCCTTCCG GAGACCCCAC CTCTCGCTGC GGGGTGGCCT
601CGGGCTGGAA CCCCGCCATC CTACGGGCCC TGGACCCTTA CAAGCCGCGG CGGGCGGGCT
661TCGGGGAGAG TCGTAGCCGG CGCAGGTCTG GGCGCGCCAA GCGTTTCGTG TCTATCCCGC
721GGTACGTGGA GACGCTGGTG GTCGCGGACG AGTCAATGGT CAAGTTCCAC GGCGCGGACC
781TGGAACATTA TCTGCTGACG CTGCTGGCAA CGGCGGCGCG ACTCTACCGC CATCCCAGCA
841TCCTCAACCC CATCAACATC GTTGTGGTCA AGGTGCTGCT TCTTAGAGAT CGTGACTCCG
901GGCCCAAGGT CACCGGCAAT GCGGCCCTGA CGCTGCGCAA CTTCTGTGCC TGGCAGAAGA
961AGCTGAACAA AGTGAGTGAC AAGCACCCCG AGTACTGGGA CACTGCCATC CTCTTCACCA
1021GGCAGGACCT GTGTGGAGCC ACCACCTGTG ACACCCTGGG CATGGCTGAT GTGGGTACCA
1081TGTGTGACCC CAAGAGAAGC TGCTCTGTCA TTGAGGACGA TGGGCTTCCA TCAGCCTTCA
1141CCACTGCCCA CGAGCTGGGC CACGTGTTCA ACATGCCCCA TGACAATGTG AAAGTCTGTG
1201AGGAGGTGTT TGGGAAGCTC CGAGCCAACC ACATGATGTC CCCGACCCTC ATCCAGATCG
1261ACCGTGCCAA CCCCTGGTCA GCCTGCAGTG CTGCCATCAT CACCGACTTC CTGGACAGCG
1321GGCACGGTGA CTGCCTCCTG GACCAACCCA GCAAGCCCAT CTCCCTGCCC GAGGATCTGC
1381CGGGCGCCAG CTACACCCTG AGCCAGCAGT GCGAGCTGGC TTTTGGCGTG GGCTCCAAGC
1441CCTGTCCTTA CATGCAGTAC TGCACCAAGC TGTGGTGCAC CGGGAAGGCC AAGGGACAGA
1501TGGTGTGCCA GACCCGCCAC TTCCCCTGGG CCGATGGCAC CAGCTGTGGC GAGGGCAAGC
1561TCTGCCTCAA AGGGGCCTGC GTGGAGAGAC ACAACCTCAA CAAGCACAGG GTGGATGGTT
1621CCTGGGCCAA ATGGGATCCC TATGGCCCCT GCTCGCGCAC ATGTGGTGGG GGCGTGCAGC
1681TGGCCAGGAG GCAGTGCACC AACCCCACCC CTGCCAACGG GGGCAAGTAC TGCGAGGGAG
1741TGAGGGTGAA ATACCGATCC TGCAATCTGG AGCCCTGCCC CAGCTCAGCC TCCGGAAAGA
1801GCTTCCGGGA GGAGCAGTGT GAGGCTTTCA ACGGCTACAA CCACAGCACC AACCGGCTCA
1861CTCTCGCCGT GGCATGGGTG CCCAAGTACT CCGGCGTGTC TCCCCGGGAC AAGTGCAAGC
1921TCATCTGCCG AGCCAATGGC ACTGGCTACT TCTATGTGCT GGCACCCAAG GTGGTGGACG
1981GCACGCTGTG CTCTCCTGAC TCCACCTCCG TCTGTGTCCA AGGCAAGTGC ATCAAGGCTG
2041GCTGTGATGG GAACCTGGGC TCCAAGAAGA GATTCGACAA GTGTGGGGTG TGTGGGGGAG
2101ACAATAAGAG CTGCAAGAAG GTGACTGGAC TCTTCACCAA GCCCATGCAT GGCTACAATT
2161TCGTGGTGGC CATCCCCGCA GGCGCCTCAA GCATCGACAT CCGCCAGCGC GGTTACAAAG
2221GGCTGATCGG GGATGACAAC TACCTGGCTC TGAAGAACAG CCAAGGCAAG TACCTGCTCA
2281ACGGGCATTT CGTGGTGTCG GCGGTGGAGC GGGACCTGGT GGTGAAGGGC AGTCTGCTGC
2341GGTACAGCGG CACGGGCACA GCGGTGGAGA GCCTGCAGGC TTCCCGGCCC ATCCTGGAGC
2401CGCTGACCGT GGAGGTCCTC TCCGTGGGGA AGATGACACC GCCCCGGGTC CGCTACTCCT
2461TCTATCTGCC CAAAGAGCCT CGGGAGGACA AGTCCTCTCA TCCCAAGGAC CCCCGGGGAC
2521CCTCTGTCTT GCACAACAGC GTCCTCAGCC TCTCCAACCA GGTGGAGCAG CCGGACGACA
2581GGCCCCCTGC ACGCTGGGTG GCTGGCAGCT GGGGGCCGTG CTCCGCGAGC TGCGGCAGTG
2641GCCTGCAGAA GCGGGCGGTG GACTGCCGGG GCTCCGCCGG GCAGCGCACG GTCCCTGCCT
2701GTGATGCAGC CCATCGGCCC GTGGAGACAC AAGCCTGCGG GGAGCCCTGC CCCACCTGGG
2761AGCTCAGCGC CTGGTCACCC TGCTCCAAGA GCTGCGGCCG GGGATTTCAG AGGCGCTCAC
2821TCAAGTGTGT GGGCCACGGA GGCCGGCTGC TGGCCCGGGA CCAGTGCAAC TTGCACCGCA
2881AGCCCCAGGA GCTGGACTTC TGCGTCCTGA GGCCGTGCTT GCCAACTTTC TTGTACAAAG
2941Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)